Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1672 ATGTGCCACGATAACTTCCAGGCCCATTCCTTAGAAGAGACAACTACAGCTGCAGATAGTCTCCTAATATATTGCAAACCAGTTGAACTATACAACATCCTTCATCTTCGTTCACTTAACAATCCTTCTTTTCTTCGACGTTGCTTGCATTACAAGTTACAAGCTAGGCGAAAGCAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTACAGGGACTACAACAACATAGTACGTAAAACTGAAGTGACCGAAGACTTTTCGTGTCCATTTTGTTTGATGCTATGTGCAAGCTTTAAGGGTTTACGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCAGTGAACGTCTCGGTGAAAATTGATATCTTTAGACCTGAGACTGTAGCAGATGGGGTGGACCCGCAACTACAAACTTTCTCCTTCTGCACAAGACCACGTAAGCGTAAGTTAAAGAACTCTATTCAGAATGGGAAGTATGTGCAGTTCTTGGAGATGGATTCACCTAGACCTGCCACAGAAGCCATGCCCAAGGGATCTATTGGGCATAATGCTGATGGTGTATCATGTGAAAAAGAGGGCAGCCTTTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGAAAGAGAAAATATTGGGCCTGAATTTCCTTCCTCTACGGAGTGCATTGAACGTGTTGCATCATCCAGCTCAATTATTCCAGGTGTCTCTATAGCTATCAGTCAATCTTGTACGGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTGCCACCAGCCAAATCAAGGAAGTTAACAATAGAACGAGACCCTAGAAACCGCATGCTCTTACAGAAACGGCAGTTTTACCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGCGAGGATGAAGTAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTAGATGATTTCGTTGATGTCACCAAAGATGAAAAGCGGCTTATGCACTTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCTTGGGCATGTGAAGCATTCTCGAAGCTTCACGGGAAAGAGCTTGTCTCATCTTCAGCTCTCTTTTGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGAAGAGAGTTTGGATACGATGAAAAGCGGCGAAAGAGATGACGGCGACAACGAGTAG 1314 42.92 MCHDNFQAHSLEETTTAADSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKQRVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDIFRPETVADGVDPQLQTFSFCTRPRKRKLKNSIQNGKYVQFLEMDSPRPATEAMPKGSIGHNADGVSCEKEGSLSFPIETYLQNAQQERENIGPEFPSSTECIERVASSSSIIPGVSIAISQSCTGPECYKVLSGSDHLPPAKSRKLTIERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVSSSALFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKEESLDTMKSGERDDGDNE 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31430522 31447928 + Sed0011949.1 Sed04g1672 710275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1672 437 CDD VEFS-box_EMF2-like 291 417 - -
Sed04g1672 437 Pfam VEFS-Box of polycomb protein 283 412 IPR019135 -
Sed04g1672 437 CDD ZnB-Zn_EMF2-like 12 134 - -
Sed04g1672 437 PANTHER POLYCOMB GROUP PROTEIN 8 60 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1672 Sed-Chr4:31430522 Sed04g1675 Sed-Chr4:31430522 1.30E-253 dispersed
Sed04g1672 Sed-Chr4:31430522 Sed04g1673 Sed-Chr4:31430522 1.80E-228 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1672 - - - 0.0