Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1673 ATGTGCCACGATAACTTCCAGGCCCATTCCTTAGAAGAGACAACTACAGCTGCAGATAGTCTCCTAATATATTGCAAACCAGTTGAACTATACAACATCCTTCATCTTCGTTCACTTAACAATCCTTCTTTTCTTCGACGTTGCTTGCATTACAAGTTACAAGCTAGGCGAAAGCAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTACAGGGACTACAACAACATAGTACGTAAAACTGAAGTGACCGAAGACTTTTCGTGTCCATTTTGTTTGATGCTATGTGCAAGCTTTAAGGTACCGAAAAGAGGGAAGGGAGGAAGAAAGAAGAAGAAGAAGAGGTTTCGATCATACCGTTTGTACCCAAGCTGCTACTCGTTATTGACTGTAGCAGATGGGGTGGACCCGCAACTACAAACTTTCTCCTTCTGCACAAGACCACGTAAGCGTAAGTTAAAGAACTCTATTCAGAATGGGAAGTATGTGCAGTTCTTGGAGATGGATTCACCTAGACCTGCCACAGAAGCCATGCCCAAGGGATCTATTGGGCATAATGCTGATGGTGTATCATGTGAAAAAGAGGGCAGCCTTTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGAAAGAGAAAATATTGGGCCTGAATTTCCTTCCTCTACGGAGTGCATTGAACGTGTTGCATCATCCAGCTCAATTATTCCAGGTGTCTCTATAGCTATCAGTCAATCTTGTACGGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTGCCACCAGCCAAATCAAGGAAGTTAACAATAGAACGAGACCCTAGAAACCGCATGCTCTTACAGAAACGGCAGTTTTACCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGCGAGGATGAAGTAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTAGATGATTTCGTTGATGTCACCAAAGATGAAAAGCGGCTTATGCACTTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCTTGGGCATGTGAAGCATTCTCGAAGCTTCACGGGAAAGAGCTTGTCTCATCTTCAGCTCTCTTTTGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGAAGAGAGTTTGGATACGATGAAAAGCGGCGAAAGAGATGACGGCGACAACGAGTAG 1287 43.12 MCHDNFQAHSLEETTTAADSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKQRVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKVPKRGKGGRKKKKKRFRSYRLYPSCYSLLTVADGVDPQLQTFSFCTRPRKRKLKNSIQNGKYVQFLEMDSPRPATEAMPKGSIGHNADGVSCEKEGSLSFPIETYLQNAQQERENIGPEFPSSTECIERVASSSSIIPGVSIAISQSCTGPECYKVLSGSDHLPPAKSRKLTIERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVSSSALFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKEESLDTMKSGERDDGDNE 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31430522 31447928 + Sed0011949.2 Sed04g1673 710276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1673 428 PANTHER POLYCOMB GROUP PROTEIN 8 60 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed04g1673 428 Pfam VEFS-Box of polycomb protein 274 403 IPR019135 -
Sed04g1673 428 CDD VEFS-box_EMF2-like 282 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1673 Sed-Chr4:31430522 Sed04g1675 Sed-Chr4:31430522 4.30E-246 dispersed
Sed04g1672 Sed-Chr4:31430522 Sed04g1673 Sed-Chr4:31430522 1.80E-228 tandem
Sed04g1673 Sed-Chr4:31430522 Sed04g1674 Sed-Chr4:31430522 1.30E-178 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1673 - - - 0.0