Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1676 ATGTTCTTCAAGTATGATGGTTTCTTGAGTTCCCATAATCCAAGAGTGATTGAGGGTTTACGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCAGTGAACGTCTCGGTGAAAATTGATATCTTTAGACCTGAGACTGTAGCAGATGGGGTGGACCCGCAACTACAAACTTTCTCCTTCTGCACAAGACCACGTAAGCGTAAGTTAAAGAACTCTATTCAGAATGGGAAGTATGTGCAGTTCTTGGAGATGGATTCACCTAGACCTGCCACAGAAGCCATGCCCAAGGGATCTATTGGGCATAATGCTGATGGTGTATCATGTGAAAAAGAGGGCAGCCTTTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGAAAGAGAAAATATTGGGCCTGAATTTCCTTCCTCTACGGAGTGCATTGAACGTGTTGCATCATCCAGCTCAATTATTCCAGGTGTCTCTATAGCTATCAGTCAATCTTGTACGGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTGCCACCAGCCAAATCAAGGAAGTTAACAATAGAACGAGACCCTAGAAACCGCATGCTCTTACAGAAACGGCAGTTTTACCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGCGAGGATGAAGTAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTAGATGATTTCGTTGATGTCACCAAAGATGAAAAGCGGCTTATGCACTTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCTTGGGCATGTGAAGCATTCTCGAAGCTTCACGGGAAAGAGCTTGTCTCATCTTCAGCTCTCTTTTGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAAAGAAGAGAGTTTGGATACGATGAAAAGCGGCGAAAGAGATGACGGCGACAACGAGTAG 1071 43.23 MFFKYDGFLSSHNPRVIEGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDIFRPETVADGVDPQLQTFSFCTRPRKRKLKNSIQNGKYVQFLEMDSPRPATEAMPKGSIGHNADGVSCEKEGSLSFPIETYLQNAQQERENIGPEFPSSTECIERVASSSSIIPGVSIAISQSCTGPECYKVLSGSDHLPPAKSRKLTIERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVSSSALFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKEESLDTMKSGERDDGDNE 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31437780 31447928 + Sed0011949.5 Sed04g1676 710279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1676 356 PANTHER POLYCOMB GROUP PROTEIN 17 347 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed04g1676 356 CDD VEFS-box_EMF2-like 210 336 - -
Sed04g1676 356 Pfam VEFS-Box of polycomb protein 202 331 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1674 Sed-Chr4:31430522 Sed04g1676 Sed-Chr4:31437780 4.90E-148 dispersed
Sed04g1676 Sed-Chr4:31437780 Sed07g1236 Sed-Chr7:9202622 2.00E-87 dispersed
Sed04g1675 Sed-Chr4:31430522 Sed04g1676 Sed-Chr4:31437780 6.00E-193 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1676 - - - 0.0