Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g1701 ATGGAAGATTTTGCAATAATGGGTGGGTTGGTTGGAGTGCAGTTTGTTTATGCAGGGAACTCTGTTATTATGAGTTTTCTTATGGCTTTTGGCATTGATCCTTTGACTCTTGTCATCTTGTCTACCTTCTCTACTTTCCTCATTGTCTCTCCCATTGCTGTTTATTTTGAAAGATCTCAATGGCCAAAGAAACTTAGTCTAAAGCTGATTTCTGAGCTTCTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCTCTTTTTCTGAAAGGAATACAGCTAACTTCACCGTCGTTAGCGACCTCGATGCCGAATCTAGCCCCGGGACTCATCTTTGCTATTGCTTGGATCTTTAGATTAGAAAAGGTTCGGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGCGTGATAGGCGCATTCACCATGAGCATAATGCAAAGCACTTCGTCGAATGAAACTGCAGAAAATGTTGTCCAACAACTTCTATCACCTCCGACCGATCAAGCATTTGATGAACAGAAGATCTTCGGTTGCATGTATCTCTTCTCGGCGATTGTCGTTTTGTCTAGCGTTGTTGTTCTCCAGGCAGCGACACTAGGCGATTTCCCGGCACCAATGTCGTTGTGTGCGATAACATCCCTCATCGGAGTGCTCTTAACCGTAGCTGTACAGCTAGTTCTATATCAGAAACTTGAAATTGGTTGGTCACATCTCAGTGTTAAAGATTTGATTGCCTACTGTGTTATAGGCGGAACCGTTAGCGGGGCCTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTATGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCAATCAACATTGGGAGCGTTGCTGGTATGTTCCTCATGTTCACTGGCCTTTACTTCGTGCTGTGGGCGAAAGGGAAGGAAGGTTATGCCAACCGAAACTGTCCCGAGAGTGATAGTTGA 1017 44.54 MEDFAIMGGLVGVQFVYAGNSVIMSFLMAFGIDPLTLVILSTFSTFLIVSPIAVYFERSQWPKKLSLKLISELLLISFGGVTLFQSLFLKGIQLTSPSLATSMPNLAPGLIFAIAWIFRLEKVRLSCIYSKIKILGTFLCVIGAFTMSIMQSTSSNETAENVVQQLLSPPTDQAFDEQKIFGCMYLFSAIVVLSSVVVLQAATLGDFPAPMSLCAITSLIGVLLTVAVQLVLYQKLEIGWSHLSVKDLIAYCVIGGTVSGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSVAGMFLMFTGLYFVLWAKGKEGYANRNCPESDS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31679149 31682165 + Sed0006331.1 Sed04g1701 710304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g1701 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 149 - -
Sed04g1701 338 PANTHER WAT1-RELATED PROTEIN 11 327 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed04g1701 338 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020(InterPro)
Sed04g1701 338 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020(InterPro)
Sed04g1701 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3993 Sed-Chr1:69012952 Sed04g1701 Sed-Chr4:31679149 2.30E-51 dispersed
Sed04g1701 Sed-Chr4:31679149 Sed03g2986 Sed-Chr3:46697725 2.50E-31 dispersed
Sed04g1701 Sed-Chr4:31679149 Sed05g0966 Sed-Chr5:8034085 1.90E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g1701 - - - 0.0