Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g1863 | ATGGAAAAGGATCAAGTTGATTCGAGTGTTCAGTTATCTGGGCTGTGGAATATCATTCGTTTAAGGAGAAGCTTCAAAGAGGACAGTGTTCCTTGCCAAATCGAAGAGGGCCTGTTCTTAGGTTCTGTTGGTGCTGCCCATAACAAGGATGAACTGAAGAAATTGAATATCACTCACATTTTAACCATAGCTTGTTCCTTGCCACCTGCTGATCCAAATGATTTTGTGCAGAAAGTAGTTGGTGTCTTGGACACTAGAGAAGCTAATATTCAACAGCACTTCGAAGATTGTTTCAATTTTATTGATGGAGGAAGACAATCTGGTGGAGGGGTCTTGGTTCATTGCTTTGCTGGAATATCGAGAAGTGTAACTATAACAGTTGCCTACCTGATGAAAAAGCATGGTATGAATTTAACTCAAGCGTTGGAACATGTCAAGAGTAAACGGCCACAGGCTTCTCCAAACGTCGGTTTCATGGTTCAACTCAAGGACTTCGAAACAGCTCTTCAAGCTAGCAAAGAGGATGTGGTGAAATTATCAAATGTGTGA | 549 | 41.35 | MEKDQVDSSVQLSGLWNIIRLRRSFKEDSVPCQIEEGLFLGSVGAAHNKDELKKLNITHILTIACSLPPADPNDFVQKVVGVLDTREANIQQHFEDCFNFIDGGRQSGGGVLVHCFAGISRSVTITVAYLMKKHGMNLTQALEHVKSKRPQASPNVGFMVQLKDFETALQASKEDVVKLSNV | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 33406248 | 33409233 | - | Sed0025182.1 | Sed04g1863 | 710466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g1863 | 182 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 29 | 169 | - | GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER) | |
Sed04g1863 | 182 | CDD | DSP | 31 | 164 | - | - | |
Sed04g1863 | 182 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 30 | 171 | IPR020422 | GO:0006470(InterPro) | |
Sed04g1863 | 182 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 30 | 171 | IPR029021 | - | |
Sed04g1863 | 182 | Gene3D | Protein tyrosine phosphatase superfamily | 24 | 179 | IPR029021 | - | |
Sed04g1863 | 182 | Pfam | Dual specificity phosphatase, catalytic domain | 38 | 167 | IPR000340 | GO:0016311(InterPro) | |
Sed04g1863 | 182 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 92 | 150 | IPR000387 | GO:0016311(InterPro) | |
Sed04g1863 | 182 | SMART | dsp_5 | 30 | 168 | IPR020422 | GO:0006470(InterPro) | |
Sed04g1863 | 182 | FunFam | Dual specificity phosphatase 12 | 32 | 181 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g1863 | Sed-Chr4:33406248 | Sed04g1865 | Sed-Chr4:33406248 | 9.40E-102 | dispersed | |
Sed04g1863 | Sed-Chr4:33406248 | Sed04g1864 | Sed-Chr4:33406248 | 5.80E-67 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g1863 | - | - | - | 0.0 |