Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2129 ATGTATACGGCGGTGTTCGTGGTGGCGGTGGCAGCGGCGGTGGTGGTCTGGGTGTTGAAGAATGCGAACCGATGGGTCTATGAAACCTCTCGGCTCCGTTCAAAGCGGTTTGGGCTGCCGCCCGGTGATCTCGGGTGGCCGTTCATCGGCAACATGTGGTCTTTTCTTAGAGCTTTCAAGTCTTCTCGTCCTGATTCTTTCATGGAGTCCTTCTTTTACAGGTATGGACATATAGGAATCTATAAGGCTTTCATGTTTGGATGCCCAAGCGTGATTGTGACTTCACCAGAAGCATGCAAAAGAGTTTTGAACGACGACGATGCATTCGGCCCGGGATGGCCTCGTTCCACCATGAAACTCATCGGAGAAAAATCATTCATTGGCATTTCTTACCAAGAACACAAACGACTTCGTCGTATAACTGCTGCGCCCGTCAATGGCTACGAAGCATTGACTGTGTACCTCACATACATCGAAAAGATCGTCGTTGCTTCCTTGCAAAAATGGCCCTCCATGGGACAAATAGAGTTCTTAACCGAGCTACGAAAACTTACCTTTAAGATCATTATGTATATATTTCTTAGCTCGGAGAGTGAGGCCGCAATGGAGGTTTTGGAGAGGGAGTACACATCGTTAAATTATGGTGTGAGAGCAATGGCGATCGACATTCCAGGTTTTGCTTATCATAAAGCACTCAAGGCACGGAGAAATCTTGTGGCGGCGTTTCAGTCGATTGTGAGCAAGCGAAGGAAGGAAAGAGAGAGCAATTTGGAAACAAAAAGGAGAGATATGATGGATGCTTTGCTAGATGTAGAAGATGAGAATGGTAGAAGATTGAACGATGAAGAAATCATTGATGTCTTGATAATGTACTTGAATGCAGGCCATGAATCTTCAGGTCACACAATGATGTGGGCAGTAATTTTCCTACAAAAACATCCCAAATTCCTTGAAAAGGCCAAGGAAGAGCAAGAAGAGATAGTAAGAAAACGACCTTGCGGGCAAAACGGTTTAACTCTCAAGGAAGTCCGAGAAATGGATTATCTTTCAAAGGTGATCGATGAAACACTACGTGTCGTATCATTCTCACTTATGGTCTTTCGAGAGGCAAAACATGATGTCAATATTAGTGGTTATACCATTCCAAAAGGGTGGAAAGTCTTAGTCTGGTTTAGAAGCGTTCACCACGATCCTGAAACTTATCCGAACCCAAAAGAATTTAATCCTTCAAGATGGGATAATTTCACTCCAAAAGCAGGAAGCTTTCTTCCATTTGGAGCCGGAAGTAGATTATGTCCTGGAAATGATCTTGCAAAGCTAGAAATCTCCATCTTTCTCCATTATTTTCTCCTCAATTATCAGTTGGAAAGGGATAATCCAAACAGCCCAGTGAGGTATCTACCCCATTCAAGGCCTAAAGACAATTGTTTGGCAAGGATCAAGAGAGTTGGTGCTCCACTTGATTGA 1467 43.97 MYTAVFVVAVAAAVVVWVLKNANRWVYETSRLRSKRFGLPPGDLGWPFIGNMWSFLRAFKSSRPDSFMESFFYRYGHIGIYKAFMFGCPSVIVTSPEACKRVLNDDDAFGPGWPRSTMKLIGEKSFIGISYQEHKRLRRITAAPVNGYEALTVYLTYIEKIVVASLQKWPSMGQIEFLTELRKLTFKIIMYIFLSSESEAAMEVLEREYTSLNYGVRAMAIDIPGFAYHKALKARRNLVAAFQSIVSKRRKERESNLETKRRDMMDALLDVEDENGRRLNDEEIIDVLIMYLNAGHESSGHTMMWAVIFLQKHPKFLEKAKEEQEEIVRKRPCGQNGLTLKEVREMDYLSKVIDETLRVVSFSLMVFREAKHDVNISGYTIPKGWKVLVWFRSVHHDPETYPNPKEFNPSRWDNFTPKAGSFLPFGAGSRLCPGNDLAKLEISIFLHYFLLNYQLERDNPNSPVRYLPHSRPKDNCLARIKRVGAPLD 488
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 35471300 35478691 + Sed0009039.1 Sed04g2129 710732
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2129 488 FunFam Ent-kaurenoic acid oxidase 30 483 - -
Sed04g2129 488 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 SUPERFAMILY Cytochrome P450 32 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 Pfam Cytochrome P450 40 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 CDD CYP90-like 74 482 - -
Sed04g2129 488 Gene3D Cytochrome P450 29 483 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed04g2129 488 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed04g2129 488 PANTHER CYTOCHROME P450 26 39 460 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2129 Sed-Chr4:35471300 Sed09g0957 Sed-Chr9:31147827 7.80E-119 dispersed
Sed04g2129 Sed-Chr4:35471300 Sed04g2130 Sed-Chr4:35471300 5.60E-266 tandem
Sed05g0278 Sed-Chr5:1723726 Sed04g2129 Sed-Chr4:35471300 1.00E-128 transposed
Sed02g1557 Sed-Chr2:51234556 Sed04g2129 Sed-Chr4:35471300 1.80E-200 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2129 K04123 - csv:101220640 781.941