Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2138 ATGAACATAAAGCACAGAAAAGCTAAAAAATTTCCCATTCTTCCGACCAGAAAACGGAGAAGGATGATGAACCAACCTGGAAAATGGGTGGCGCTTGTGGCGGCGATATGGATCCAAGCATTTTCAGGCACAAATTTTGATTTCCCCTCTTATTCTTCCGATCTGAAAGCGGCTCTGGGGATGTCGCAATTGGAGCTCAACTATCTCGCCGTCGCTTCCGACGTCGGAAAGGCCTTCGGGTGGTGCTCCGGCATTGCTCTCTTGTATTTTCCTTTGTGGGCGGTCATGCTCATGGCTGCTTCCATGGGGTTTATTGGCTATGGCCTTCAATGGCTTCTCATTCAAGGGATTATATCTCTGCCTTATTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGTTGGTTTAATACGGTTTGCTATGTCTCCTGCATCCAAAATTTCTCAGTCAACCGCGCGCTCGCACTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTATACACCCTAATTGCCAATGCAGTAGACCCCAATAATGCCAGCTTGTACGTCTTCCTAAATGCATTGGTTCCTCTCATCATCTCTGTCGTTGTCCTTCTCCCAATCCTTCATCAGCAACCGGCTCTGCCATCCTCTGCCGATTCCATTTGCCATGACTACCTTGTTTTCGTCTGCTTGTACATCACGGCAGCTATCACGGGCCTCTATCTGATCACCTTCAATTCAATGCCTTACAACATATACGGGTCCAAAATTCTATTGGCAGGGGCTTTGGCCCTATTGCTAGTTCCTCTTTGCTTGCCAGAAATTCTGAGTACTCGCGCGTGGTTGTTTCAGATTGCTTCCGCTGGCTTGAGATGTCTCATTCACTCTAGATTCAACCCTGTTCATCATGATCTTCAGCAGGAGCTCATCACTGTTGTAAAAGAAAGAAGTAGCACGAAGGTCACCATACCTTTTGATTATAAGGAGAAGGAAACCATTTCATGGAAGATGATGGAGAAAGAGAACTTGGAAGTGCTTGAAGAAGAGCATTCGGCTAAGATGCTCGTGCAACAATTGAATTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGGACGATTGGCTTGGTTTATAGCAACAATCTTGGGCAGATCTCACAGTCACTAGGATACAGGTCGTTAACAAGTTCGCTTGTAACACTCTACTCTTCATGCTCCTTCTTTGGACGGTTAATCTCTGCGGCCCCAGATTTCATGCATGAGAAGGTGCACTTTGCCAGAACAGGGTGGCTAGCCATAGCACTAATACCGACTCCAATCGCCTTCATTTTACTGGCTGCATCGGGCAGCATGATCGCATTACAAGCCGGCACCGGGCTGATCGGCCTAAGCTCGGGGTTCATATTCTCAGCGTCGGTCTCAATCACATCAGAGCTATTCGGTCCCAACAGCTCAGGGGTTAACCACAACATCCTCATCACCAACATCCCTCTCGGCTCGTTCCTCTACGGCGTCCTCGCGTCGAGGGTGTACGAATCAAGCGCCGGAAGTTTACATCAGAAGGCGGCGGCGCTGGAGGACGCGGTGGTGTGCGTCGGCCGGGAATGCTACCTTCAGACGTTCATATGGTGGGCTTGCATCTCCATCGTCGGCCTCGCTTCTAGCTTCTGGCTTTTCCGGCGGACGAAACCGGCGTACGACCGCCATTACGAGACTAACCTAATCAAGACACAGCCATTTTAG 1743 48.77 MNIKHRKAKKFPILPTRKRRRMMNQPGKWVALVAAIWIQAFSGTNFDFPSYSSDLKAALGMSQLELNYLAVASDVGKAFGWCSGIALLYFPLWAVMLMAASMGFIGYGLQWLLIQGIISLPYSMVYLLCLLAGCSICWFNTVCYVSCIQNFSVNRALALSLIVSFNGVSAALYTLIANAVDPNNASLYVFLNALVPLIISVVVLLPILHQQPALPSSADSICHDYLVFVCLYITAAITGLYLITFNSMPYNIYGSKILLAGALALLLVPLCLPEILSTRAWLFQIASAGLRCLIHSRFNPVHHDLQQELITVVKERSSTKVTIPFDYKEKETISWKMMEKENLEVLEEEHSAKMLVQQLNFWLYYVAYFCGGTIGLVYSNNLGQISQSLGYRSLTSSLVTLYSSCSFFGRLISAAPDFMHEKVHFARTGWLAIALIPTPIAFILLAASGSMIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLASRVYESSAGSLHQKAAALEDAVVCVGRECYLQTFIWWACISIVGLASSFWLFRRTKPAYDRHYETNLIKTQPF 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35581231 35584957 - Sed0027786.1 Sed04g2138 710741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2138 580 Gene3D MFS general substrate transporter like domains 355 567 IPR036259 -
Sed04g2138 580 Pfam Nodulin-like 28 273 IPR010658 -
Sed04g2138 580 SUPERFAMILY MFS general substrate transporter 21 565 IPR036259 -
Sed04g2138 580 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 567 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1502 Sed-Chr4:29899532 Sed04g2138 Sed-Chr4:35581231 7.30E-75 dispersed
Sed04g1503 Sed-Chr4:29899669 Sed04g2138 Sed-Chr4:35581231 7.30E-75 dispersed
Sed04g2138 Sed-Chr4:35581231 Sed13g0751 Sed-Chr13:5350332 3.40E-161 dispersed
Sed04g2138 Sed-Chr4:35581231 Sed03g0723 Sed-Chr3:4360226 4.10E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2138 - - - 0.0