Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2149 ATGAGCGGCGGAGGTGAAGGGACGACGCTGGAGTACACTCCGACGTGGGTTGTGGCCGCCGTCTGCACCGTCATCGTCGCCCTCTCCCTCGCCCTAGAGCGCCTCCTCCACTTCCTCGGCAAATACCTCAAGAGCAAGAACCAAAAGCCCCTCAATGAAGCCCTCCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGATTTATTTCGCTTCTGCTCACTGTATTTCAAAACACCATCTCTAAACTGTGCGTTCATGAGAGCTTGACGGAGCATTTTCTTCCGTGTAATCTGAAGGATAAGCTTAAAGGTGAACACGATTCGTCTTCCGGTGAATCTGCTTTGTCTACGAAGGAACATTTTCGAACGCTCTTTGCTTCGAGTGTTTCTGGTGCGGTTAGGCGCCTTCTTGCTGAGGGATCGGCTTCAGAACATGGTTATTGTGCTCAAAAGGGTAAGGTGCCATTGCTATCACTCGAAGCACTGCATCATCTACATATTTTTATCTTCATCCTAGCTATAGTCCACGTGACATTTTGCGTTCTCACTGTATTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCAGTGGGAGGATTCTATTTCAGAAGAAAACTATGATGCCGGACGAGTTCTCAAACCAAAAGTCACTCATGTCCATCAACATGCTTTTATCAAAGACCACTTTTTGGGCATTGGTAAAGATTCAGTTCTTCTTGGTTGGTTGCAATGCTTCCTTAAGCAATTTTATGCCTCTGTAACAAAATCAGATTATGTGACGTTGCGGCTTGGTTTCATTACAACACACTGCAGGGGAAACCCAAAGTTCAATTTTCATAAGTACATGATACGTGCCCTTGAAGATGATTTCAAGCATGTCGTCGGTATCAGTTGGTATCTTTGGATCTTCGTGGTTGTCTTTTTGTTCCTTAATGTTAATGGCTGGCATACATATTTCTGGATAGCATTCATTCCTCTTTTTCTTCTGCTTGCTGTGGGAACGAAGTTGGAACATGTGATAACCCAGCTGGCTCAGGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGCGATCTAGTAGTCCAACCATCCGATGATCACTTTTGGTTTCAGAGACCCCGCATTGTTCTCTTCCTGATCCATTTTATACTTTTCCAAAACGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATACGGCTTCGACTCGTGCATCATGGGAAAAATCCGCTATATCATTCCAAGGCTCATTATTGGGGTGTTTGTTCAGGTTCTTTGCAGTTACAGCACCCTACCCCTCTACGCCATTGTCACACAGATGGGAACTTCTTTCAAGAAAGCAATATTTGATGAGCATGTACAAGTAGGCCTAGTTGGGTGGGCGCAGAAGGTTAAGAAAAGAAAGGGACTGAAAGCAGCTGCTGATGGCTCAAGCCATGGAATCAAGGAAGGTGGTTCTTCTGTGGGGATTCAGCTCGGAAATGTTCTACGCAAGGCCTCGGCTCCGGCTCCAGAAGAAATCAAGCCTGATGCCTCCAAATCAAAGGATCTTCCTTAG 1557 45.28 MSGGGEGTTLEYTPTWVVAAVCTVIVALSLALERLLHFLGKYLKSKNQKPLNEALQKVKEELMLLGFISLLLTVFQNTISKLCVHESLTEHFLPCNLKDKLKGEHDSSSGESALSTKEHFRTLFASSVSGAVRRLLAEGSASEHGYCAQKGKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVFFGGLKIRQWKQWEDSISEENYDAGRVLKPKVTHVHQHAFIKDHFLGIGKDSVLLGWLQCFLKQFYASVTKSDYVTLRLGFITTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVNGWHTYFWIAFIPLFLLLAVGTKLEHVITQLAQEVAEKHVAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGKIRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGTSFKKAIFDEHVQVGLVGWAQKVKKRKGLKAAADGSSHGIKEGGSSVGIQLGNVLRKASAPAPEEIKPDASKSKDLP 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35622715 35629796 - Sed0003748.1 Sed04g2149 710752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2149 518 PANTHER MLO-LIKE PROTEIN 1 3 479 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g2149 518 MobiDBLite consensus disorder prediction 499 518 - -
Sed04g2149 518 Pfam Mlo family 8 476 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3136 Sed-Chr1:55886123 Sed04g2149 Sed-Chr4:35622715 2.40E-199 dispersed
Sed04g2149 Sed-Chr4:35622715 Sed05g3881 Sed-Chr5:46290761 3.60E-114 dispersed
Sed04g2149 Sed-Chr4:35622715 Sed09g0123 Sed-Chr9:962428 1.60E-242 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2149 K08472 - csv:101211868 908.672