Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g2316 | ATGGATGATGACATTGAAAGTGCTAGTTTGGGGGCATACCAGGACAGGCAACGGACTTTTCCTGACATGCGTAGTAAAGTCAACACCCCATTGATTTTTCGGATATTGATGGGGATAAATATTCGTGTTCTCTTAGTCATTCTTCTCTTTGCGTTTGGATTAATATTCTACATTGGAGCAAGCACTTCCCCTATTATTGTGTTTGTCTTCTCAATTTGCATCGTCAGCTTCTGCTTTTCTATATATCTCACAAAATGGGTGCTCTCAAAAGATGAAGGGCCACCAGAGATGGTTCAGATTTCAGAGGCAATACGTGATGGAGCCGAAGGTTTCTTTAGGACGCAGTATGGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGCACTACTCCACAACAACAATCTTCTGGAATAGGGAGGTCAACAACAGCTTATATTACTGTTGCATCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTTAGGGTCTCTAGTGCTGCCAGAAGGTCTGCGAGGGAGGCATTGCAGATCGCTGTTCGTGCTGGTGGTTTCTCGGCCATCGTTGTTGTTGGTATGGCTGTTATTGGTATAGCCATCCTGTATTCTGCTTTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACAAAGGTTACTGACTTGCCTCTTCTTCTAGTGGGTTATGGTTTTGGAGCTTCTTTTGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTTTACAAAAGCTGCTGATGTGGGAGCAGACCTTGTTGGAAAAGTTGAGCAGGGGATACCAGAGGATGATCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGAGACAATGTGGGCGATTGTGCCGCTCGAGGTGCAGATCTTTTTGAAAGCATTGCGGCTGAAATCATCAGTGCCATGATACTTGGGGGAACAATGGCTGAGCGCTGTAAAATTGAAGATCCATCTGGCTTCATTTTGTTTCCGCTGGTGGTACACTCCTTTGATTTGGTGGTTTCATCAATTGGCATTCTCTCTATCAGGAGGGGTGCTCGTGAATCTGGTTTGAAGAGTCCCTTGGAGGATCCAATGACTATTTTGCAGAGAGGATATTCCGTCACTATCGTTTTGGCTGTTCTAACATTTGGTTTGTCTACCCGGTGGTTGCTTCACACTGAACAAGCACCTTCAGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGTACGAGCCTGTGCGTTCATTGGCACATTCTAGCACCACAGGCCATGGGACCAACATAATTGCTGGAGTCAGCTTGGGCCTGGAATCAACTGCACTTCCTGTTCTTGTTATTAGTGTATCTATTGTTTCGGCATTCTGGTTGGGTCACACGTCAGGACTTGTGGACGAAGCTGGAATTCCAACAGGCGGGCTGTTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGTCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAGCAGCCTGAAAGCGTTAGGGAGATCACTGATCTCCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCTCTTGCATCTTTCCTACTTTTTAGTGCTTATATGGATGAGGTTGCTTCATTTGCTAAAGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGCGGCTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTAGTAAAGGAAGTAAGAAGACAGTTCATTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGATTATGGACGTTGTGTTGCTATTGTAGCATCAGCATCTTTAAGGGAGATGATTAAGCCTGGTGCTCTGGCTATCATTTCTCCTATGGCAATTGGCTTTCTGTTTAGAATATTGGGATACTATACTGGGCATCCCCTTCTAGGGGCGAAGGTTGTCGCTGCGATGCTGATGTTTGCGACGGTGTCCGGAATTCTCATGGCCCTTTTTCTGAACACGGCAGGGGGTGCCTGGGATAATGCCAAAAAGTACATAGAGACCGGAGTTCTTGGAGGCAAAGGTAGCGATTGTCATAAAGCAGCTGTAACTGGGGACACCGTTGGCGACCCATTCAAGGACACGGCAGGGCCTTCTCTTCACGTTCTCATAAAAATGCTCGCAACGATTACGCTGGTCATGGCCCCCATTTTTCTATAA | 2406 | 45.43 | MDDDIESASLGAYQDRQRTFPDMRSKVNTPLIFRILMGINIRVLLVILLFAFGLIFYIGASTSPIIVFVFSICIVSFCFSIYLTKWVLSKDEGPPEMVQISEAIRDGAEGFFRTQYGTISKMAMLLAVVILCIYLFRSTTPQQQSSGIGRSTTAYITVASFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYSAFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIFTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAERCKIEDPSGFILFPLVVHSFDLVVSSIGILSIRRGARESGLKSPLEDPMTILQRGYSVTIVLAVLTFGLSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKYEPVRSLAHSSTTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLVDEAGIPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVASFAKEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACSAVGRTAQEVVKEVRRQFIERPGIMDYTEKPDYGRCVAIVASASLREMIKPGALAIISPMAIGFLFRILGYYTGHPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL | 801 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 36809669 | 36822061 | + | Sed0023679.1 | Sed04g2316 | 710919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g2316 | 801 | PIRSF | H+-PPtase | 59 | 801 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed04g2316 | 801 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 63 | 800 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed04g2316 | 801 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 63 | 801 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed04g2316 | 801 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 68 | 800 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed04g2316 | 801 | Pfam | Inorganic H+ pyrophosphatase | 74 | 796 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g2316 | Sed-Chr4:36809669 | Sed08g0630 | Sed-Chr8:4396998 | 2.00E-127 | dispersed | |
Sed04g2316 | Sed-Chr4:36809669 | Sed12g2342 | Sed-Chr12:33387368 | 8.90E-128 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g2316 | K23025 | - | csv:101217198 | 1438.71 |