Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed04g2379 | ATGGCTGCTCTCCTTCAAACACTCTTCCTTTTCTCTCTCATCCTCCCATTTTCTTCAGCTTTGAAGAGCACTTTCATTGTGCAGGTTCACAATCATGTGCCTAAGCCTTCCATTTTCCCAACCCACAAGCACTGGTATGAGTCCTCTCTACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATGGACCCATCATTCATACTTATCACAATGTCTTCTATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTAACAAGCTTCTAAGCCTTCCCCACATCGCCTCCATCCTCCCCGAACAGGTTCGACATCCTCACACCACTCGTTCCCCTGAGTTTCTTGGCCTCAAGACTACAAACACGACTGGATTACTGAAAGAGTCTGACTTTGGATCTGACCTTGTCATTGGAGTCATTGACACTGGTATTTGGCCGGAGCGGCAGAGCTTCAACGATCGAAATCTGGGTCCTGTTCCTTCTAGATGGAAAGGAGCTTGTGTGGCGGCTAAGGACTTTCCAGCCACTTCTTGCAACCGTAAACTCATTGGGGCTCGATTCTTCTACGGTGGCTACCAGGCCACCAATGGCAAATTGAACGACACCACGGAGTACCACTCGCCGCGCGACTCGGATGGCCACGGTACTCACACGGCCTCCATTGCGGCGGGTCGTTATGTGTTTCCAGCTTCCACTTTGGGCTATGCTCGTGGTCGAGCGGCTGGAATGGCTCCCAAGGCTCGCCTTGCTGCCTATAAAGTCTGCTGGAATGCTGGCTGCTATGACTCTGATATTCTTGCTGCTTTTGATGCGGCTGTTTCGGATGGTGTCGATGTTGTGTCGCTCAGCGTCGGCGGTGTCGTTGTGCCTTACTATCTCGATGCCATTGCTATCGCCGCCTTTCGAGCTGTGGCGTCCGGTGTTTTTGTCTCGGCGTCGGCGGGGAATGGGGGCCCTGGGGGGCTTACTGTGACTAATGTAGCACCATGGGTTACCACAGTTGGAGCGGGAACTATGGATAGAGATTTCCCTGCTGATGTTAAGCTGGGAAATGGGAGGGTTATACTTGGTACTAGTGTCTATAGCGGACCGGGTTTGGTTCCGGGTCGATTGTATCCTCTTATTTATGCAGGAACAGAAGAGGGTGGTGGGTATTCTTCGTCTTTGTGCTTAGATGGTTCATTGAATCCCAATTTAGTGAAAGGGAAGATTGTACTGTGTGATAGGGGTATCAATTCAAGAGCTGCTAAAGGAGAGGTTGTGAAGAAGGCTGGAGGATTCGGAATGATTATTGCCAATGGGGTTTTTGATGGTGAGGGCTTAGTAGCTGATTGCCATGTACTACCTGCCACCGCGGTTGGTGCTACCGCCGGTGACGAGATTCGGAAATACATTGCAGAAGCAGCTAAGTCTCATTCACCACCAACAGCAACAATTATGTTCAAGGGAACTCGGCTTGGGGTCAGGCCAGCACCCGTCGTTGTTTCGTTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAGATCATGAAGCCCGATATGATTGCGCCTGGTTTGAACATTCTTGCTGCTTGGCCTGATAAAATTGGGCCTTCTGGAATTCCTACAGACAAGCGTACCATAGAGTTCAACATACTTTCAGGCACTTCCATGGCTTGTCCTCATGTCTCTGGCTTGGCTGCCCTGCTTAAGGCAGCACACCCTGGATGGAGTCCAGCAGCTATAAAATCAGCACTAATGACCACAGCTTACACCTTGGATAACCGGGGTGAGACAATGCTGGATGAATCTTCAGGCAATACTTCCACAGTTATGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCAATGGACCCTGGTTTAATCTATGACATTAACACAAATGATTATGTTGATTTCTTGTGTAATTCCAACTACACAACCAAGAGTATCCAAGTCATTACAGGGAAAATTGCAGATTGTAAAGGGGCAAAAAGGGCAGGCCATACTGGAAACTTGAACTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGCAAGCATAAGATGTCTACACATTTCATTAGAACTGTGACCAATGTTGGGAACACCAATTCAATCTATAAGGTAGCAATAAAGCCTCCAAGTGGAGTTTCAGTGACAGTGGAGCCAGAAAGGCTGACATTTACAAGGGTTGGACAAAAATTGAGCTTCTTGGTCAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAGCACAAAGAGTGGTTCTATAGTTTGGACTGATGGAAAGCACATAGTCACCAGTCCACTGGTTGTAACCATGCAGCAACCTCTGCTGTAG | 2328 | 48.41 | MAALLQTLFLFSLILPFSSALKSTFIVQVHNHVPKPSIFPTHKHWYESSLPSSSSSSSSSNGPIIHTYHNVFYGFSAKLSPFEVNKLLSLPHIASILPEQVRHPHTTRSPEFLGLKTTNTTGLLKESDFGSDLVIGVIDTGIWPERQSFNDRNLGPVPSRWKGACVAAKDFPATSCNRKLIGARFFYGGYQATNGKLNDTTEYHSPRDSDGHGTHTASIAAGRYVFPASTLGYARGRAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIAAFRAVASGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYSGPGLVPGRLYPLIYAGTEEGGGYSSSLCLDGSLNPNLVKGKIVLCDRGINSRAAKGEVVKKAGGFGMIIANGVFDGEGLVADCHVLPATAVGATAGDEIRKYIAEAAKSHSPPTATIMFKGTRLGVRPAPVVVSFSARGPNPESPEIMKPDMIAPGLNILAAWPDKIGPSGIPTDKRTIEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVMDFGAGHVHPQKAMDPGLIYDINTNDYVDFLCNSNYTTKSIQVITGKIADCKGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGNTNSIYKVAIKPPSGVSVTVEPERLTFTRVGQKLSFLVRVQAMAVRLSPGSSSTKSGSIVWTDGKHIVTSPLVVTMQQPLL | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 37174613 | 37177604 | + | Sed0021135.1 | Sed04g2379 | 710982 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed04g2379 | 775 | SUPERFAMILY | Subtilisin-like | 106 | 620 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed04g2379 | 775 | Gene3D | - | 338 | 485 | - | - | |
Sed04g2379 | 775 | Pfam | Peptidase inhibitor I9 | 24 | 105 | IPR010259 | - | |
Sed04g2379 | 775 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 105 | IPR037045 | - | |
Sed04g2379 | 775 | Gene3D | - | 633 | 771 | - | - | |
Sed04g2379 | 775 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 546 | 556 | IPR023828 | - | |
Sed04g2379 | 775 | Gene3D | Peptidase S8/S53 domain | 132 | 629 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed04g2379 | 775 | FunFam | Subtilisin-like protease SBT1.9 | 15 | 105 | - | - | |
Sed04g2379 | 775 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 109 | 616 | - | - | |
Sed04g2379 | 775 | Pfam | Subtilase family | 130 | 597 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed04g2379 | 775 | FunFam | subtilisin-like protease SBT1.5 | 338 | 484 | - | - | |
Sed04g2379 | 775 | FunFam | Subtilisin-like protease SBT1.5 | 633 | 771 | - | - | |
Sed04g2379 | 775 | CDD | PA_subtilisin_like | 344 | 477 | - | - | |
Sed04g2379 | 775 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 54 | 766 | IPR045051 | - | |
Sed04g2379 | 775 | FunFam | Subtilisin-like protease SBT1.5 | 132 | 351 | - | - | |
Sed04g2379 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 208 | 221 | IPR015500 | - | |
Sed04g2379 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 130 | 149 | IPR015500 | - | |
Sed04g2379 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 545 | 561 | IPR015500 | - | |
Sed04g2379 | 775 | Pfam | Fibronectin type-III domain | 664 | 768 | IPR041469 | - | |
Sed04g2379 | 775 | SUPERFAMILY | PA domain | 398 | 462 | IPR046450 | - | |
Sed04g2379 | 775 | CDD | Peptidases_S8_3 | 103 | 582 | IPR034197 | - | |
Sed04g2379 | 775 | Pfam | PA domain | 371 | 459 | IPR003137 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g0207 | Sed-Chr1:1663281 | Sed04g2379 | Sed-Chr4:37174613 | 1.70E-237 | dispersed | |
Sed04g2379 | Sed-Chr4:37174613 | Sed08g0922 | Sed-Chr8:7816080 | 1.10E-204 | dispersed | |
Sed04g2379 | Sed-Chr4:37174613 | Sed09g0258 | Sed-Chr9:2064825 | 9.20E-138 | wgd | |
Sed04g2379 | Sed-Chr4:37174613 | Sed09g1717 | Sed-Chr9:40408908 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed04g2379 | - | - | - | 0.0 |