Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2736 ATGGCGAGAACCACACATTGCAGCGCCATCAGCTTCTCAGAGCTCTCGTCCGGCTCCGACGTTTCAGTTTCTTGCATTTCCTTTCCAAGCAGGAACAGCTTAAGATTCTCGGCCGCCATTGTTCTTTCTCCTCTTAAGCTTAAAAAACAAGCATCTGTAACACGAGCCAGACCTGTAAATTCTGCCAAAATTGCTGCTGAAGCTATTCAGGAAGCTGTCCCTCCAGCCCTAACTTCGGCTTCGGAACCTCCTTCTGTCTTTGATGGAACCACCAGGCTTTATATATCTTATACATGCCCTTACGCGCAACGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTAAGAGATAGGCCATCTTGGTACAATGAAAAAGTTTACCCACCTAACAAGGTACCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAGGGGCCTTCATTATTTCCTAATGATCCGAGAAAGAGAGAGTTCGCTGAAGAGTTGATAAACTACATTGACTCTTTCAGGGGATCTGTGGTTTCTTCATTTAAAGAAGAAGGAAATGAAGCTGATGTGGCATTTGACTACATGGAATCAGCTCTTTTGAAATATGACGATGGCCCCTTTTTTCTAGGCCAGTTTAGTTTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAGGCTTATGACATCACTGCAGGCAGGCCAAAACTAGCAGCTTGGCTTGAGGAGATGGACAAGATCGAGGGGTACCGACAAACAAAGGGCGATCAACAGGAGCATGTGAACAGCTACAAGAAGCGGTTCTTGGAATGA 894 43.29 MARTTHCSAISFSELSSGSDVSVSCISFPSRNSLRFSAAIVLSPLKLKKQASVTRARPVNSAKIAAEAIQEAVPPALTSASEPPSVFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLRDRPSWYNEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPNDPRKREFAEELINYIDSFRGSVVSSFKEEGNEADVAFDYMESALLKYDDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKAYDITAGRPKLAAWLEEMDKIEGYRQTKGDQQEHVNSYKKRFLE 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 39574289 39579502 + Sed0015073.1 Sed04g2736 711339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2736 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 89 170 IPR004045 -
Sed04g2736 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 67 296 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Sed04g2736 297 CDD GST_C_Lambda 175 292 - -
Sed04g2736 297 FunFam Lambda class glutathione S-transferase 168 297 - -
Sed04g2736 297 Gene3D - 168 297 - -
Sed04g2736 297 Pfam Glutathione S-transferase, C-terminal domain 210 269 - -
Sed04g2736 297 FunFam Glutathione S-transferase L2, chloroplastic 64 167 - -
Sed04g2736 297 Gene3D Glutaredoxin 64 167 - -
Sed04g2736 297 SUPERFAMILY Thioredoxin-like 83 171 IPR036249 -
Sed04g2736 297 SUPERFAMILY GST C-terminal domain-like 166 295 IPR036282 -
Sed04g2736 297 Pfam Glutathione S-transferase, N-terminal domain 93 169 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g3068 Sed-Chr3:47423015 Sed04g2736 Sed-Chr4:39574289 5.50E-70 dispersed
Sed04g1311 Sed-Chr4:27396333 Sed04g2736 Sed-Chr4:39574289 6.00E-85 dispersed
Sed04g2736 Sed-Chr4:39574289 Sed04g2737 Sed-Chr4:39574289 1.20E-151 tandem
Sed02g0718 Sed-Chr2:45010403 Sed04g2736 Sed-Chr4:39574289 6.10E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2736 K00799 - csv:101220995 451.055