Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2794 ATGGTTATCGAAGTTGCGGTCAAGGCTGCCGCTGGTGCGCCAAATGTTATTGGAGATTGCCCTTTTAGCCAGAGGATACTGTTAACCCTAGAGGAGAAGAAAATAGCTTACAAATTGCATCTCATCGATCTCTCTGCAAAACCCAGTTGGTTTGTGGAAGCGAGCCCTGAAGGGAAGGTCCCTTTGGCGAAGTTTGATGACGAATGGGTTTCTGATTCTGATGTCATTGCGGGGATTATAGAGGAAAAGTTCCCTGAGCCTTCACTTGTTACTCCTCCTGAATATTCTTCTGTGGGATCAAAGATATTTGGTACTTTTGTAAAATTTTTGAAGAGCAAGGACACGAACGATTGTTCAGAACAGGCTTTCCTTGCAGAGTTGAAGGCGCTCAACGAACATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGTTAACTGCTGTTGATTTGAATCTTGCACCAAAATTGTACCATGTTGATGTTGCACTTTGGCATTTTAAGAATTGGTCCATCCCCAAAGACTTGGCTTGTTTAATTGCCTACAAAGAGTTGCTTTTCGCTCGCGAATCATTCGTGAAAACGAAGGCTGCCCCGGAATATGTGATTGCTGGATGGGAGCCTAAGGTGAATCCTACATGA 642 44.08 MVIEVAVKAAAGAPNVIGDCPFSQRILLTLEEKKIAYKLHLIDLSAKPSWFVEASPEGKVPLAKFDDEWVSDSDVIAGIIEEKFPEPSLVTPPEYSSVGSKIFGTFVKFLKSKDTNDCSEQAFLAELKALNEHLKAHGPYVAGEKLTAVDLNLAPKLYHVDVALWHFKNWSIPKDLACLIAYKELLFARESFVKTKAAPEYVIAGWEPKVNPT 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 39968998 39972521 + Sed0013664.1 Sed04g2794 711397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2794 213 SUPERFAMILY GST C-terminal domain-like 95 211 IPR036282 -
Sed04g2794 213 CDD GST_N_family 20 77 - -
Sed04g2794 213 SFLD Glutathione Transferase (cytosolic) 20 163 IPR040079 -
Sed04g2794 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 209 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Sed04g2794 213 Pfam Glutathione S-transferase, C-terminal domain 121 178 - -
Sed04g2794 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Sed04g2794 213 Gene3D Glutaredoxin 1 90 - -
Sed04g2794 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 212 IPR010987 -
Sed04g2794 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Sed04g2794 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Sed04g2794 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Sed04g2794 213 Gene3D - 91 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2794 Sed-Chr4:39968998 Sed07g2442 Sed-Chr7:40239368 4.50E-95 dispersed
Sed04g2794 Sed-Chr4:39968998 Sed07g2441 Sed-Chr7:40212005 6.90E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2794 K21888 - csv:101203666 351.673