Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g2821 ATGGAGAGTTTTGTGAAGTTTCTTAGATTATCAAAGCCATATCTTATAGCCATCTTTCTCCAAATTGGTTATGCTGGAATGGCAATTCTTGCAAAGTATGCTTTGGACAAGGGGATGAGCCCACATGTTTTCGTGCTTTATCGCCATGCTATCGCAACTCTCGTCATTGCACCTTTTGCCATTGTCATCGAAAGGAAGACGCGGCCAAAGATGACATTTTCGGTGTTCTGGAAGATTGTGATGCTCGGTTTTTTAGAACCGGTGATCGATCAAAACTTGTTCTTTAGTGGTATGAAGCTTACAACAGCAACCTTCACAACTACAATGTCCAATATGCTACCAGCCTTTTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATGGTAGGAACCATAGTGACAATTGGAGGAGCCATGATTATGACATTCATAAGTGGACCAATGTTGAGTCTTCCATGGACCAAACCCAACCAGCCCTCTGGCTCTTCAGCTGCTACTCACCAAAGCTCACTCAAGGGTGCACTGATGATTGCCATTGGCTGCATTTGCTGGTCCGCTTTCATCATTCTTCAGGCAATTACATTGAAAGCGTACGCGGCGGATTTGTCGCTTACGGCATTGATATGCTTGGTGGGAACCATTGGAGGCTCTGGGGTGGCTTTGATCATGGAGAGGGGGAACCCTGCTGCTTGGGCTTTGCACTTTGACAAACAGCTCTTGGCTGTGGTTTATACTGGAATAATATGTTCAGGAGTAACTTATTATATTCAAGGAGTAGTGATGCAAACAAAAGGACCTGTTTTTGTGACAGCATTCAGTCCCTTGACTATGATTCTTGTTGCAATTGTGAGCTCCTTCATGCTGTCTGAGATACTGTTCTTGGGCAGAATTATTGGAGCTGTGACCATAATCATTGGCTTGTACATGGTTTTGTGGGGCAAAAGCAAAGATCAGATTTCAATTGTTGAATCAGGTTGTGATAAGATTACACATTGTGAACAACAAATGACCGGAAAGGATGATGCTTGGAATACGATGATTCAGTCGAATGACGAACTCGTGGCGGTTAATATTGCCAAAAAGGACACAAATTGA 1131 43.32 MESFVKFLRLSKPYLIAIFLQIGYAGMAILAKYALDKGMSPHVFVLYRHAIATLVIAPFAIVIERKTRPKMTFSVFWKIVMLGFLEPVIDQNLFFSGMKLTTATFTTTMSNMLPAFSFLMAWACRLEKVNILKRGSQAKMVGTIVTIGGAMIMTFISGPMLSLPWTKPNQPSGSSAATHQSSLKGALMIAIGCICWSAFIILQAITLKAYAADLSLTALICLVGTIGGSGVALIMERGNPAAWALHFDKQLLAVVYTGIICSGVTYYIQGVVMQTKGPVFVTAFSPLTMILVAIVSSFMLSEILFLGRIIGAVTIIIGLYMVLWGKSKDQISIVESGCDKITHCEQQMTGKDDAWNTMIQSNDELVAVNIAKKDTN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40145493 40150898 - Sed0012221.1 Sed04g2821 711424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g2821 376 PANTHER WAT1-RELATED PROTEIN 17 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed04g2821 376 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020(InterPro)
Sed04g2821 376 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Sed04g2821 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Sed04g2821 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2821 Sed-Chr4:40145493 Sed07g2469 Sed-Chr7:40415188 3.40E-162 dispersed
Sed04g2820 Sed-Chr4:40128616 Sed04g2821 Sed-Chr4:40145493 4.60E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g2821 - - - 0.0