Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g3117 ATGGCTGAAAATGGCTCCCCAGAGGGACGATCTCTGGCTTTGACCCCGACTTGGTCTGTTGCCTCCGTGTTGACAATTTTCGTCGCGGTTTCGTTGCTTGTAGAACGCTCTATTCATAGACTAAGCTCTTGGCTGGGAAAAACTAATAGAAAACCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCCTTGCTTCTGACAGCGACATCGAGTGTGATATCGAATATCTGCATTCCATCCAAGTTTTACAGTACCTCTTTTACTCCATGCACCCAGTCGGAAATCGATGAACAAAACGAAGATAATTCTTCATCTGAGAAGCGAAAACTATACATGGTTTCTGCTTTCCCACATTTGTATAGGAGGATGCTAACTGTGAACAAAAATACTTGCAAAGAGGGTCATGAGCCATTTGTTTCATATGAAGGTCTTGAGCAATTGCATCGCTTTATCTTTATAATGGCACTAACTCATATATCTTATAGTTGCTTGACAATGTTGCTTGCAGTTGTGAAGATCCACAGTTGGAGAGTATGGGAAAATGAAGCTCACATGGACCACCATGATTTATTCAATGATACAACGAGAGAAAAGATAATGCAGAGACAATCTACCTTTGTACAATATCACACCTCCAATCCTTTAACCAGGAATGGTGTTCTTATTTGGATTACATGTTTCTTTCGGCAATTTGGGCATTCGGTTGTTCGTTCCGACTACCTCACACTTCGCAAAGGCTTCATCATGAACCACAACCTCTTGTCAAGATATGATTTCCATAGCTATATGGTTCGTTCAATGGAAGAAGAATTCCAAAGGATAGTTGGTGTGAGTGGTCCACTGTGGGGATTTGTAGTTGCATTTCTGCTGTTTAATGTGAAAGGGTCTAACCTATATTTTTGGATAGCAACTATTCCTGTTACTCTTGTTCTTTTAGTTGGCACAAAGTTACAACATGTTATTGCAACTTTGACATTGGAGAATGCTGGCATAACCGGATTCTTTTCGGGAGCAAAGCTGAGGCCTCGTGATGATCTCTTTTGGTTTAAGAAGCCTGAACTCCTGTTGTGCTTGATCCATTTTGTTCTTTTCCAGAATGCTTTTGAATTGGCTTCTTTCTTCTGGTTCTGGTGGCAATTTGGATACAGTTCTTGCTTCATTAGTAATCATCTGCTTGTCTATATAAGGCTGATCTTGGGGTTTGCTGGACAATTTCTTTGCAGTTATAGCACCTTGCCCCTATATGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTAATTCCACAAAGGATAAGAGAAACAATCCATGGGTGGGGTAAGTCAGCTAGAAGGAAGAGAAGACTGCGGATATTTACCGATGATGCTACAATCAACACAGAAACAAGCACCGTGTTGTCTCTTGAGGATGACGACAATCAGCATATTGATTCGCCCAAAATTGCCACCGGGTATGCCGAAATCGAGTTGCAGCTACCTACTGCAGCAAATGTGTCCACCACTGTTCCTAATGATACATTACCTGTCCCTCAAAACTTTGATGTTGAATCATCTATGCCAGTACAAAGGTAA 1602 41.26 MAENGSPEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSVISNICIPSKFYSTSFTPCTQSEIDEQNEDNSSSEKRKLYMVSAFPHLYRRMLTVNKNTCKEGHEPFVSYEGLEQLHRFIFIMALTHISYSCLTMLLAVVKIHSWRVWENEAHMDHHDLFNDTTREKIMQRQSTFVQYHTSNPLTRNGVLIWITCFFRQFGHSVVRSDYLTLRKGFIMNHNLLSRYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLCLIHFVLFQNAFELASFFWFWWQFGYSSCFISNHLLVYIRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATINTETSTVLSLEDDDNQHIDSPKIATGYAEIELQLPTAANVSTTVPNDTLPVPQNFDVESSMPVQR 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 42019245 42027100 - Sed0024557.1 Sed04g3117 711720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g3117 533 PANTHER MLO-LIKE PROTEIN 1 1 468 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed04g3117 533 Pfam Mlo family 9 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0155 Sed-Chr3:956509 Sed04g3117 Sed-Chr4:42019245 4.40E-227 dispersed
Sed04g1597 Sed-Chr4:30737466 Sed04g3117 Sed-Chr4:42019245 4.20E-124 dispersed
Sed04g3117 Sed-Chr4:42019245 Sed05g2862 Sed-Chr5:39719941 4.10E-97 dispersed
Sed04g3117 Sed-Chr4:42019245 Sed11g1950 Sed-Chr11:33809596 2.10E-234 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g3117 K08472 - csv:101207170 979.933