Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g3507 ATGGGGAAGAAACGCAATAACGAGAAACAGAAGGTAATTCTACCGCCGGAGCTTCCACCGGAGGTCACCGAGGAAGATATCGAAATCTCCGATGAGGATTTGGACTTTGTTAAGGAGAATAGAGACTACGCCGTCTCTGTTTCCCGCCTAGACACGAAATCCATTACCAAGCATGTTACGCGTGTTGCTAATGTTGAAGAAGATGCTTTGGAGGCTTTATACGAGAAACGTTTGAGCAAGAAGTTGCTGCAGAAACCAGAGGAGGAAATTAAGCCTCAGGTTGATCGCGTTGATGCTCTTCCCGTCAAAACACTTGACGGGACGCTGTACTACCGGACATCAAAAGCAACTGATGCGCTTGAAAATGGTGCCAATGAAGAGGAAGTTGAAGAGGACCGGGTGGATAATAGTATGTTGAAGTTAAATAAAGCAGAAAGGAGGGCAAAGCTGAAGAAAGGTAAAAAGGTTGCTAAGAAACAAGATGATGGAACCAAAGCTGAAGAAGTTCAACCAACCCCACAAGCAGCAGTTGTGGCTGAAGTGTTAGAAGATCTTACTACTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCGCTTCTAGAGGACCCAAATTCCAATATTAAATCTTTGAAGGAGATGCTACAAATCATTAAAGATAATGATCAAGCAATTGTGAAACTAGGACTTCTATCATTATTAGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGATAAAGAGCTAGAAATGAAAGTATCCAAGGATGTCAAGAAAATGCGGAACTATGAGTATACTCTTCTCACTACTTATAAGGGATACTTGCAGAAACTAATGTCATTAGAAAAATTAGCATCTTTTCAACATGTGGTTATTCGCTGTATCTGTACTTTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACGTTGTTAGGTATTGTTGTAAAAAACATAAGCTCCTCTGACGATGTTGTAAGAAAACTTTGTTGTGGTACTATCAAGTCTTTATTCATCAATGGCGGAAAGCATGGTGGTGAAGTGACTGTGGAGGCTGTCCGCCTGATTGCTAATCATGTTAAATTTCATGACTGCCAATTGCATCCTGATTCCATCGAGCCTTTTGTACATTTAACATTTGACGAGGATCTGCGGAAAGTAGAAAAGAAAGAAGAGCATGTTAAAGTTAAGTACAATAAATACAAGAAAATGAAGAAGCGTGAGGAATCAAGTAACAAGCAGGGGAATGAAGGAAAACAAAGTATGAGGACAAAGTTTACCGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGACGTTATGAAGCAAAGAGAGATGCAGTCAGATACACTCTCTGCTCTATTTGAAACATATTTCCGGATCTTAAGGCGTACAATGCACTCATTAACTGCTAGGCCTGAAGCAGATATTACTGCATCTAGTACCAGCCCTTTTGGATCTCATCCTCTGCTTGCTCCCTGTTTGAATGGATTGGGGAAGTTCTCACACCTCATCGATTTAGATTTCATGGGTGATCTTATGAATTATCTAAAGAGGCTTGCTTCTGGTGGTGATAATTCTTCTGAGAAACAGTCTCATTGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCCTTGAATGTTGATCTACAAGATTTTTTTGTCCAGCTATACAACATTGTAAACGAGTACAGGCCTGGGAGAGATCGCGGTGAAGTGTTGGCTGAAGCTTTGAAGATAATGTTGTGTGATGATAGACAACACGACATGCAAAAGGCCGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATCCTTTGGATCTGCCGAGGCGTTAGCAGCATTGGTCACTGTAAAGCATCTTCTTCAAAAAAATATCAAGTGCCGCAACCTCTTGGAAAATGATGCTGGAGGAGGTTCAGTGTCTGGCTCTATTGCGAAGTATCAGCCATATGCCTCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAAGTTAATCTTCTGTCGAAGCATTATCATCCAGCTGTCTCAACTATGGCTGCTAGCATATCAAACATGAATAGTACTCAACCCCAAGTCTATGTCGCCACTATTTCTCCCCAACAGGCACTCAAAGACATGTCGCTCGAACACGAATCTTTTAACCCACAATTCAATGCCAAAAAAGCTAACAAGAGGAAAAGACCTTTCGAATCTTCTCGATCTACGTTCGATACGTGCAGCGCCATTGACGAAAATGAAGTGAAGGAAAAACTTTCAGCAAGATTCTCTCTTCTCCGGGACATCAAGGACAATGAAAGATTGAGGACTGAATTGGACCGTACAAATTTGTCTTTGCAGCTATATGAAGAATACAAAAGGCAAAAGAAAAAACCTAAGAAGTCTAGGAATGTTTGA 2484 41.3 MGKKRNNEKQKVILPPELPPEVTEEDIEISDEDLDFVKENRDYAVSVSRLDTKSITKHVTRVANVEEDALEALYEKRLSKKLLQKPEEEIKPQVDRVDALPVKTLDGTLYYRTSKATDALENGANEEEVEEDRVDNSMLKLNKAERRAKLKKGKKVAKKQDDGTKAEEVQPTPQAAVVAEVLEDLTTEKTFESKKQKLAELGIALLEDPNSNIKSLKEMLQIIKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTDKELEMKVSKDVKKMRNYEYTLLTTYKGYLQKLMSLEKLASFQHVVIRCICTLLDAVPHFNFRETLLGIVVKNISSSDDVVRKLCCGTIKSLFINGGKHGGEVTVEAVRLIANHVKFHDCQLHPDSIEPFVHLTFDEDLRKVEKKEEHVKVKYNKYKKMKKREESSNKQGNEGKQSMRTKFTEEVAADYRAASLAPDVMKQREMQSDTLSALFETYFRILRRTMHSLTARPEADITASSTSPFGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQSHCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVNEYRPGRDRGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLSFGSAEALAALVTVKHLLQKNIKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWEVNLLSKHYHPAVSTMAASISNMNSTQPQVYVATISPQQALKDMSLEHESFNPQFNAKKANKRKRPFESSRSTFDTCSAIDENEVKEKLSARFSLLRDIKDNERLRTELDRTNLSLQLYEEYKRQKKKPKKSRNV 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 44546346 44556014 - Sed0009567.1 Sed04g3507 712110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g3507 827 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 6 772 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Sed04g3507 827 MobiDBLite consensus disorder prediction 150 171 - -
Sed04g3507 827 Pfam CBF/Mak21 family 554 709 IPR005612 -
Sed04g3507 827 MobiDBLite consensus disorder prediction 413 432 - -
Sed04g3507 827 PIRSF Noc3 3 802 IPR016903 -
Sed04g3507 827 SUPERFAMILY ARM repeat 214 588 IPR016024 -
Sed04g3507 827 Pfam Nucleolar complex-associated protein 194 284 IPR011501 -
Sed04g3507 827 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g3507 K14834 - csv:101213821 1253.04