Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g3509 ATGGAGATAGTTGATGCAAATTCCTTCACCGAGGAAGAAAAGCTGGAAGAATCAATTGGAGGAGTTCAAAGAATTGGAGTGTTCGCAGAGCTGAAACATTACTGTTTAGAGCTGTTACAGCTTCTCCAAACGCCCAAAAAGCATTCCTCTTCAGTTCATTCCTTGCTCGAGCTGCTTCGCAAAACTTCATCAACTTCTCTGCAACCTTGCTCTGATTTTGTGCTGTTTCCGCTGCTGCTGCTATTCGATGCAGCTGTTGTGGATAGATCTCAGCAGAAGGTTGATTCCAAAGAAAACATTATGGCGTCTGTCGGGCATGATCTGCCTCATAAGTTGAGTGATAGTGTGGCAGAAGGTGTGCTTCAGTGCCTTGAAGAACTGCTGAAGAAGTGTCATTTAGGATCCGTGGAACAGATGATTGTAGTGCTGAAAAAGTTAACATGTGGAGCTTTGTTATCTCCCTTTGAGGCATCAGAAGAGTTTCGTGAAGGAGTAATCAAGTGTTTTAAGGCAATTTTTATGAATTTAGGTCCCTGCTCAGATGGTGCATGCTCATGTAAACATATATCTGGTTCTCCAGCACTTTCAGAAAACAAAGAATTTCAAGGTCATCTTGATGTGCTTTCCGAAGAGTCAATGCCAAATGAATGCTTGCTTGAATTTCTTCGGAGTGAAACTGCTTCAGCTGCTCTTGGACACTGGCTGTCACTTCTTCTCAAAGCTGCAGATATTGAGGCTGCACGAGGACATCATGGAAGTTCTAAGATTCGTATTGAAGCCTTTATGACCCTTCGCATACTTGTTGCAAAGGTTGGAACAGCTGATTCATTGGCCTTTTTCTTGCCTGGTGTTGTCAGCCAATTTTCTAAAGTTCTGCGGGCTTCTAAAACATCATTAAGTGGGGCTGCGGGAAATTCAGAAGCCACAAACCAAGCAATTAGAGGCTTGGCTGAATATCTTATGATAGTCCTTGAGGATGATGCTAATAAATCTAGTCTTGATGTGCTTATGGATTTTCAATCTGAAATTATGTTAAAGGGTAAAAAGGCACAATATATTCTAGAGGAACTTCGTCAATTGCCAGATAAAGTCCAAGGTGGTAGTATGAAGGTAGAAGAATCTTCATCTGCCAAGGTGGTGAATAAAACTACTTATAAATCTAGTTCTAAGGAGAAGATAAGTGCTGACTATCTTAAGGGGAACAAGTCTTTTCACGTGGATCGTACAAAAGAATGGCTTGCAGAAACTTCAACACATGTGGATAAACTATTAAGCGGAACTTTTCCATATATTTGTGTCCATCTTTTAAAAAAGGTTAGACTGAGCATCCTGGCTGCCGTAAAAGGACTTATATCAAGGTGCAGTTATACGCTAAAGGAGAGTAGATTGATGCTTTTGGAGTGCTTGTGTGCTTTGGCTATTGATGACTCTGATGATGTTTCATTCACTGCACAAGAGTTCCTTGAGTATTTATTCAGGATAACCCAGAACCATCAATTGCAGCATGATATTGGCAAAATTTTTGTGAGGCTGGTTGAAAAGCTTCCGAATGTGGTTCTTGGAAGTGACGAGAAGTTTGCTCTTTCACATGCTCGACAGTTACTTGTAGTGGCATACTATTCTGGTCCTCAACTCATTATAGATCATCTTATCCACTCTCCAGTAACAGCCATTCACTTTCTAGATGTATTTGCTGTTTGTCTAAGTCAGAATTCAGTTTATGCCAGTTCTCTTGGAAAATTTCTTTCAGCCAGACCATCTTCTGTAGGATATCTGCACTCTCTTACTGAACTAAAAGTTGGAACTAGTTTCATCAGTGATTGCCTTTCCATCTCGAATACTGCCTCACCTGCAGCTCGAGAGCTCTCAATAGTTCAGGAGAAAGCTATACAGCCAAATGGTCACGTGCTTCCTCGCATGCCCCCATGGTTTCATGGGGTTGGCAGTCAGAAACTGTATGAAGCTCTTGGAGGAGTTCTCCGACTTGTTGGTTTGTCTCTGGTGTCAGATAGAAAAAGTGAAGGCAGCTTGTCGGTTACCATTGATATCTCACTGGGAAACTTGCAAAAATTGGTTTCTGACATTCGAAAGAAGGAATACAGTGAAGAAAGCTGGGACAATTGGTATAGGAGGACTGGTTCAGGACTATTAGTGCGCCAGGCAAGCACTGCTGTGTGTATTTTGAATGAGATGATATTTGGTGTTTCAGAATATTCAGTAGACTACTTCTCAAGTACATTTCAGAGAGCAAGAATGCATAGGAAGATTACCAATGACTATGAATGTTCCACAACTAATCAATCTAGTTGGAAGATTTCCCACGAAAAAGTTAGAGCTCAATTTATTGATTGTATTGGTAGAATCTTGCATGAGTACCTATCTCCTGAGATATGGGACCTACCAATACAACATGAATCTTCCTTGGTGCATCCTGTTGGTGAAGACATTAGTTTACACCTCTTCAGGGACACTGCTATGCTGCATCAGGAAAGATCATTCTTTATACCCTATGTTATAATTGAAGGAATAGGCATTTTTAGTATGTGCCTTGGAAAAGATTTTTCTTCTTGTGGATTTCTTCATTCATCTCTTTATTTGTTGCTTGAGAATCTTATTTCCTCAAATGTGGAAGTTAAAAGCACCACTGATGCTGTCTTACATGTCCTTTCTTCTACTTCTGGCTACCCAACAGTTCAAGACTTGGTTTTGGAAAATGCAGATTATGTGATTGATTCTATATGTCGGCAGTTACGTCATTTGGATCTGCACCCTCACGTGCCGAATGTTCTTGCTGCCATCCTTTCCTATATCGGAATAGCGCATGAGATTTTGCCTCTGTTGGAGGAACCTATGCATTCTGTATCGCTGGAACTTGAGATTCTTGGAAGACACCAGCACCCCAATCTAACTGGTCCTTTCTTAAAGGCAGTTGCAGAGATTGCCAGAGTATCAAAGTATGAATCTAATACCCTGCCAAATAAAGCCGCATCATATCACGAACATGTTAAGTCTATAATCTCTAAGGAGGAATCTGAGTCTGGAGGAGTGTCTAGATCGTGTCTGGATGATGACACGAAAATATCTTCCATGGAATCAGAGTGGGAAAATATTTTGTTCAAGTTCAACGATTCCAGAAGATATAGGCGAACAGTCGGATCCATTGCTGGTTCATGCATCGTGACTGCTATACCTCTTTTAGCTTCACAGAATCAAGCATTGTGCTTGGTGGCTTTAGATATTGTTGAGTATGGCGTTGTGGCATTGGCAAAAGTGGAGGAAGCCTACAAGCATGAGAAAGATACCAAGGAAGAAATTGAGGAAACGTTGCGGTCGCATTCCTTTTATCGACTTCTGGACACTTTGGATGTTTCTGAAGAGGGGTCTGATGAAAATAGGTTGCTTCCAGCAATGAATAAAATATGGCCCTTTCTGGTTGCTTGCATTCAGAACAAAAATCAAGTGGCTGCCCGAAAATGCTTAAATGTGATAAGCAGTTCAGTACAAATCTGTGGAGGAGATTTCTTCACGCGCCGTTTCCATACCGACGGGTCTCATTTTTGGAAGCTCCTAACGACATCCCCATTCATTAGGAAACCAAACTTGAGAGAAGAGAAGCCAGTGTTACAACTTCCTTACCGAAACACATCGAAATCATCAGAGGACACGGTTGCTGAAGTTTCCAGTTTGAAAGTTCAAGTTGCAGTGCTGAATATGATTGCCGATCTATCTAAAAACAAAAGAAGTGCATCGGCATTGGAAGTAGTTCTCAAGAAGATCAGTGGCCTAGTAGCTGGTGTAGCCTTTAGTGGAGTTATGGGGCTTAGGGAAGCATCTTTGAAAGCGCTCGAAGGACTTGCATCTATCGATCCCGATCTCATTTGGCTTCTCGTCGCCGATGTTTACTACTCCATGAAGAAAGACATGCCGTCACCACCAACACCAGATTTTCCCGAGGTATCTCGACTTCTACCTTCACCTTTATCTTCAAAAGGATATCTTTATGTACTTTATGGGGGTAAAAGTTATGGTTTTGACATTGAAGTTTCGTCTGTGGAGTTTGTATTTAAGAAATTGCAATCCAATATTTTTATTTGTTAA 4098 41.24 MEIVDANSFTEEEKLEESIGGVQRIGVFAELKHYCLELLQLLQTPKKHSSSVHSLLELLRKTSSTSLQPCSDFVLFPLLLLFDAAVVDRSQQKVDSKENIMASVGHDLPHKLSDSVAEGVLQCLEELLKKCHLGSVEQMIVVLKKLTCGALLSPFEASEEFREGVIKCFKAIFMNLGPCSDGACSCKHISGSPALSENKEFQGHLDVLSEESMPNECLLEFLRSETASAALGHWLSLLLKAADIEAARGHHGSSKIRIEAFMTLRILVAKVGTADSLAFFLPGVVSQFSKVLRASKTSLSGAAGNSEATNQAIRGLAEYLMIVLEDDANKSSLDVLMDFQSEIMLKGKKAQYILEELRQLPDKVQGGSMKVEESSSAKVVNKTTYKSSSKEKISADYLKGNKSFHVDRTKEWLAETSTHVDKLLSGTFPYICVHLLKKVRLSILAAVKGLISRCSYTLKESRLMLLECLCALAIDDSDDVSFTAQEFLEYLFRITQNHQLQHDIGKIFVRLVEKLPNVVLGSDEKFALSHARQLLVVAYYSGPQLIIDHLIHSPVTAIHFLDVFAVCLSQNSVYASSLGKFLSARPSSVGYLHSLTELKVGTSFISDCLSISNTASPAARELSIVQEKAIQPNGHVLPRMPPWFHGVGSQKLYEALGGVLRLVGLSLVSDRKSEGSLSVTIDISLGNLQKLVSDIRKKEYSEESWDNWYRRTGSGLLVRQASTAVCILNEMIFGVSEYSVDYFSSTFQRARMHRKITNDYECSTTNQSSWKISHEKVRAQFIDCIGRILHEYLSPEIWDLPIQHESSLVHPVGEDISLHLFRDTAMLHQERSFFIPYVIIEGIGIFSMCLGKDFSSCGFLHSSLYLLLENLISSNVEVKSTTDAVLHVLSSTSGYPTVQDLVLENADYVIDSICRQLRHLDLHPHVPNVLAAILSYIGIAHEILPLLEEPMHSVSLELEILGRHQHPNLTGPFLKAVAEIARVSKYESNTLPNKAASYHEHVKSIISKEESESGGVSRSCLDDDTKISSMESEWENILFKFNDSRRYRRTVGSIAGSCIVTAIPLLASQNQALCLVALDIVEYGVVALAKVEEAYKHEKDTKEEIEETLRSHSFYRLLDTLDVSEEGSDENRLLPAMNKIWPFLVACIQNKNQVAARKCLNVISSSVQICGGDFFTRRFHTDGSHFWKLLTTSPFIRKPNLREEKPVLQLPYRNTSKSSEDTVAEVSSLKVQVAVLNMIADLSKNKRSASALEVVLKKISGLVAGVAFSGVMGLREASLKALEGLASIDPDLIWLLVADVYYSMKKDMPSPPTPDFPEVSRLLPSPLSSKGYLYVLYGGKSYGFDIEVSSVEFVFKKLQSNIFIC 1365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 44573044 44584470 + Sed0006880.1 Sed04g3509 712112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g3509 1365 SUPERFAMILY ARM repeat 253 1294 IPR016024 -
Sed04g3509 1365 Coils Coil 1088 1108 - -
Sed04g3509 1365 Pfam TELO2-interacting protein 1 864 954 IPR049362 -
Sed04g3509 1365 PANTHER TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER 26 1356 IPR052587 GO:0005737(PANTHER)|GO:0006338(PANTHER)|GO:0070209(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g3509 K20403 - csv:101212708 2212.19