Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g3557 ATGGAGGACGGATTCGCAGCTGAGCGTCTCTTCAATCAAGGATTCTCCTACACCTACGACGACGTCATCTGCCTTCCTCACTACATCGACTTCCCCACCGATTCCGTCCAACTCGCCACTCAACTCACCCGCAACATCTCCCTCTCCATCCCCTGCGTCTCCTCCCCCATGGACACCGTCACCGAAGCTTACATGGCCTCCGCCATGGCCGCTCTCGGCGGCATCGGCATCATCCACTCCAACGCCACTCCCTCCCACCAATCCGCCATGGTTCGCGCCGCTAAAGCTCGACGAGTTCCCATCCTCTCCAATCCGCTCTTCAAATCCCCCTTCGATCGGATCGATTCCGAAGAGGATTTCGCCTCTTCGCCTTTCGTTTTAGTTACCGAGTCTGGTTCCTCGAACTCGAAGCTTCTCGGCCATGTCTCGCACGCGGATTGGACTGCTCAGGGCGATAAGGAAGTTAAGATTTATGATTATATGGTTAATTCCGGGGTTTCGGTTCCGTGGAACTATGATTTAGGGCAAGTGGAGGCGTTTTTGGAGGAGAAGAAGGCGGAATTTGTGCCGTTGTTGAAGGATGGTGAAGTTGTTGATGCTGTGACGAAGTCGGAAGTAGAGAGAATCAGGAGTTATCCGAAGCTCGGTGTTGGTTCCGTTGCTGCGGATGGTTCGTGGCTCGTCGGGGCTTCCATTGGAACTAGGGAACATGATAAGGAGAGGCTGAAACATTTGGTGCAGGCTGGTATAAACGTAGTGGTGTTAGATAGTTCGCAGGGGAACTCTAGTTATCAGATTGATATGATCAAGTATGTGAAGCGGACGTATCCTGAGCTGGACGTGATTGGCGGGAATGTTGTTACGATGGCGCAGGCACAGAATTTGATTCAAGCCGGCGTCGATGGATTGCGGGTTGGGATGGGCTCTGGTTCTATCTGCACCACGCAGGAGGTTTGTGCGGCCGGACGGGGACAGGCAACTGCGGTTTACAAGGTGTCATTAGTTGCTTCTCAAAGTGGTGTTCCTGTCATTGCTGATGGTGGAATTTCAAACTCTGGACATATTGTTAAGGCTCTAGTTCTTGGTGCATCCACGGTAATGATGGGAAGTTTCTTGGCTGGAAGCACCGAGTCCCCCGGCACCTTCGAAACTAAGAATGGTCAGCGGGTGAAGAAGTATCGGGGTATGGGGTCGTTAGAAGCAATGACCAAAGGCAGTGATGCCAGGTACTTGGGGGATACTGCAACCCTTAAGATAGCTCAGGGGGTTGTTGGAGCAGTTGCTTATAAGGGTTCAGTCCTGAAGTTCATACCCTACTCAATGCAAGCAGTGAAGCAAGGGTTCCAAGATCTTGGTGCTTCCTCCATCAAATCTGCCCATGATCTCTTAAGCTCAAAGGTCCTAAGACTGGAGGTCCGTTCGGGAGCTGCACAGGTCGAAGGTGGAATTCATGGACTGGTGTCGTATGAAAAGAAATCGTTTTGA 1485 51.78 MEDGFAAERLFNQGFSYTYDDVICLPHYIDFPTDSVQLATQLTRNISLSIPCVSSPMDTVTEAYMASAMAALGGIGIIHSNATPSHQSAMVRAAKARRVPILSNPLFKSPFDRIDSEEDFASSPFVLVTESGSSNSKLLGHVSHADWTAQGDKEVKIYDYMVNSGVSVPWNYDLGQVEAFLEEKKAEFVPLLKDGEVVDAVTKSEVERIRSYPKLGVGSVAADGSWLVGASIGTREHDKERLKHLVQAGINVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRVGMGSGSICTTQEVCAAGRGQATAVYKVSLVASQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTESPGTFETKNGQRVKKYRGMGSLEAMTKGSDARYLGDTATLKIAQGVVGAVAYKGSVLKFIPYSMQAVKQGFQDLGASSIKSAHDLLSSKVLRLEVRSGAAQVEGGIHGLVSYEKKSF 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 44954066 44958015 + Sed0007161.1 Sed04g3557 712160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g3557 494 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 303 315 IPR015875 GO:0016491(InterPro)
Sed04g3557 494 Pfam IMP dehydrogenase / GMP reductase domain 16 484 IPR001093 GO:0003824(InterPro)
Sed04g3557 494 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 2 493 IPR005990 GO:0003938(InterPro)|GO:0003938(PANTHER)|GO:0005737(PANTHER)|GO:0006164(InterPro)|GO:0006183(PANTHER)
Sed04g3557 494 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 16 492 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
Sed04g3557 494 NCBIfam IMP dehydrogenase 16 460 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
Sed04g3557 494 Gene3D Aldolase class I 4 494 IPR013785 -
Sed04g3557 494 SMART IMPDH_2 15 484 - -
Sed04g3557 494 FunFam IMP dehydrogenase, putative 4 494 - -
Sed04g3557 494 CDD IMPDH 16 473 IPR001093 GO:0003824(InterPro)
Sed04g3557 494 SUPERFAMILY CBS-domain pair 125 208 IPR046342 -
Sed04g3557 494 PIRSF IMPDH 4 494 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
Sed04g3557 494 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 7 493 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g3557 K00088 - csv:101217193 886.715