Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed04g3826 ATGGCGAATCTCTCCAGTCTCGTTCACGAGCTTCGAGAACGCATAGCAGCTTCCTCATCCTCTCCCCCTAATCGCGCCGACGACGTCGGCCTCGAAGTCCGATTTCGCGCCGTCCTTCCCAATCTCCTCCACGCCTACGTCGTTCCTTCTTCCTCAGTGAATGAGAGAGAAGTTGTTGCTGTGTTGAAGCTTCTCTCGCACACTGCCAGGAATTTTCCTGGTGTTTTCTACCATGGAAGAGCCACCGCCGTTTTGCCTGTCATCGGTCGGATATTGCCTTTTTTTGCGGAGCCTGCTATTCAGGCAAGACATGGAGTAATTTTTGAAACTGTCGGTTCCCTTTTATCCTTGCTCCGTACCGGAGCAAGGGATGCTTACCGCCAGTTTTTTCTTGATGCCATCTTAGTCGTTGAAGATATTTTGTACATTGCATCACTTGGTTCTGATACTTCAAGCTGTGTGGAGTCCACAAATGTCACTTTGAATTGCTTCTCTGAATCTTTGAAGGGAATCTTTGAGGATCCCGATCATATTGGGGATCTTCCAGAAAGCAACAGACCAACTAATGGCTCTGGCATTTTGATTAATCTAACAGGGAGCAAAAGGTGGCAGCCTTTTGCGACTTGGATTATTAAGCTTCTTGGCAAATGCTTGGCTGAGGGAACTGTGTATGTTGAAGGGCTTATCAGTATGTCAGATGTTTCGGCAGCCTGTTCTTTATTATGTTATGGGGATGCTGATTTGCAAATGGCATGCTTTGACTTTGCACGCATTGTTGGATTGGTGATTGATGATGTCGTTCCTTATCAGCCTCTAATCCAGTCAATATCTACTATATTAAGTGAAGACAAACAGGGGCTTCCTATATTTAGGAATTCATCATATGATACTTCTATTGGAGGTTGTCTTACTGTGCTGTACTCCAACTGTTGCGATGATGTTGTCAAGCTAACGGCTGCTGACATGGTTGGCATATTTTCACAGTCCTTGTGGAGAACCAAGAGCATGGATCTCAAGGTTTCATTATGCAATGCATACATACGGATTGCTAAAATCTGCCCTCCTCATATCTGGAGGCCTGAAATACTCGTTGATATGCTTTCTTTTCCAGAACCTTGCTTTGCTTTGATAGATTGCTTCCAAGCAGCTTTATCAATTCTTGGTCCTGATTTTGTTGGAGGGTCTTTACCCCCTGGCCTGGGTTTGTCAGAATTGAGCAATAAATCAATGGAAAACTCAAGAGTTGGAGAAAAGAGATCCTTAGAGGATTTAGATACTTTCGAGAACAAGAGACAGAAGATTGATGGAAAAATTGGGAGCTCTGAAGTTGATGTGCTGGTTGAATGCAAGAAGCTTCACATCAAAATATGTGAAACTGAAGAAACTTATGCAAATAATTTGTATAAGTTACTTGTTTCATTTGTTGGATGTTTGAGAGCTTCTTCCATCAAAGCTGATGCTTTAAGACCAGAAGTTTCATTAACAGCCCTTAGCATGCTGTGTATTGCATTCTGTCGGCACCCTGAAACTCATTTGTCCCAGGTCATATTTCAGGAGATGGTTTCATGGATTCCTTGGATATACAAGCAGGCGAAGCAAGGAAGCTCTATTTCCCTCGATATATCCATATTTCTAGAAGGAATTCACAACATACTTCTCTTACCAACCCATCTATCTTCATGTTTACTTTCCCTCCTTTCTGGATGTGATGATGAATGCACAGAAACTCTATCTGTGATACTTAAAGTTCCATGGACCCATTCAATCACCAGTACTGAATCTCACAAGCCATGGAAGACAAAATCTTTCTCTGTTCAGGTAGCATCAAAAGTTACTTCTATCTCAAAGACTGAAACTGATCTCGAGATCCTGGATTTGAGTCTTGTTGATGAGGATGATGAAGTTAGAATGGAAGCTGCCATTTCAATTCCAGTGATTGTGCTATGGACTGGTTTTGATAAGCTCACTCAGTTATTTAGGAGGCTGGAGATCTTGGAGGGAGAAAAGCATGAAAAAGTTAAGAAGATTATTCCATTTTCTCTTGGGTTTTTGTCATGCCTTTATGGATCTTGCCATTCGGTAAATGATCAAAATATTAGCAGGTGCAAATTATTTTTAAATATAAACAGTGATAGATGTTGCCAGACAGTTGACCATATGCTTCAAGGATTTTGGTGTTCAAAATGTGATCAGACTGTTCAGCATGACCATAAACTTTATACAAATATAATTCAGCCACTTGACTGTTATGAAAAAATGAATTTGGATCGTGATATCGTCCATTTGATGTCGATGTTCTTTAACCTTCTTTTCGATGAATCTTCAGAAGAGGTTCAGGTTTCTTGTGTGGAAATTATTAGACGCATACTGGTCCATGGGCCTAGGGATGCTCTACATCAAATGAAGACCGATTGGCTTAAATGTGTTGAGTTTTTGCTTCTTAACAGAAAAAAAGTAATAAGAGAAGCATTTTGCCTTCAAGTTGGTTCCTTCCTCGAGGATCATATACTGAGCTGCTTTTTCCCAGAAGAAAACTTCTCAAACAAAAGGAAAGAGTTAAAGTTTTTGGATTTTATTAAACATGCAATGGTGCCAACTACAGATCCCCAAATTCTCGACACTCTACTAGAATCTGTAGCAAACCTCATGACTGTAGTTGATATTCACAGTGAATTTTTCTCTATTTCTCTTTTATTGTTGGTTGATCATCTTGATAATTCTCATATAACAGTGAGGATGAGCGCTTCAAGATCAATTCACAAAGCTTGCCGTTTTCATTTTAATGGTAAATTTGAACTAGTATTTTCCAAAGTTGTCCATCTTCGGAATGAGCTATTTGATTATCTCTCTACGAAACTTGTTAGCCGTCCAAAAATTGTACAAGAATTCGCAGAAGCTGTTTTGGGTGTTGAAACTGAAGTACTTGTTAAGAAAATGATTCCTGTTGTTCTTCCCAAGCTGGTGGTCTCTCATCAGAATAATGATCAAGCTATTGAATCTTTGTATGAATTAGCTAAATGCGTGGACACTGATATGGTGACGTTGATAGTCAATTGGTTGCCAAAAGTTCTTGCCTTTGTTCTCTACCAAGCAAATGGGAAGGAGTTACTTTCCGCCTTGGAATTTTATCATGCTCAGACTGGTTCAAATCAGGAAGAAATTTTTGCAGCTGCATTACCTGCACTTTTAGATGAACTAGTATGCTTTGTGGATGGTGGCGATTCAGATGAGGTCAGTAAAAGGTTAGCAAGAGTTCCTGAGATGATATTGCAAGTTGCAAGAGTTCTCACTGGTGGGGATGATCTTCCAAGTTTTTTGAGAAATCATTTTGTTGGCCTCCTTAACATCATTGATAGGAAAATGCTCCATGCAGAGGATGTTTGCCTGCAGAAACAAGCACTGCAACGTATTGAAATGCTGATAAAATTGATGGGATTTCATCTTAGTACCTACGTTCCTAAACTAATGGTTCTTCTTATGCATGCTATTGGGAAGGAAGTACTGCAAAGTGAAGGTCTCATTGTCTTGAACTCTTTTATCCAACAACTGGCTAAAGTATCACCATCTAGTATCAAGTATGTGCTTTCTCAAGTTTTTGCTGCACTTGTGCCTTTCCTGGAGAGAGATGAAACTTCCATACATTTAGATATGGTGGTGAAAATTCTGGAAGAACTTGTTTTAAAGAACAAGAGTATACTAAAGGTGCATATACGTGAATTTCCTCCATTGCCTTGTATTTCTGCTCTGACAGAGGTGAACAGAGCTATACATGAAACTCGTGGGTCAATGTCTTTAAAGGATCAACTACGAGGTGTTGTTGATGGCTTAAATCACGATAACTTGAATGTTAGATACATGGTGGCATGTGAATTGAGCAAGTTGCTGAACATGAGAAGCAAGGAAGTTACAACTTTGATAAGTACTGAAGCTGATCCAGACATGGATGTTTTGAGCTTACTAATCTCATCCTTGCTAAGAGGGTGTGCTGAGGAGTCCAGAACTGCAGTGGGCCAGCGACTGAAATTGGTTTGTGCTGATTGTCTTGGAGCACTAGGTGCTGTAGATCCTGCTAAAGTGAAGAGCTTTTCATGCCAACGATTTAAAATTGAATGTTCTGATGATGATCTAATCTTCGAGTTAATTCACAAACATTTAGCTCGGGCTTTTAGAGCTGCACCAGATACCATTATTCAAGATTCAGCAGCATTAGCCATACAAGAGCTTCTAAAAATTGCAGGGTGTAAGGCATCACTGGATGAAAATGCTACTGCTTCAGTGCCACCCTCTTTGAAAGACAAAGGAGCTTTAAAAATTGTCACATGTGATTCTTCAGTTGGTGGTAATGAGATGAGTATAAGGGGTCAGAGATTGTGGGGTCGCTTTTGTGATTATGTGAAAGAAATTATAGCACCTTGCTTAACCTCAAGATTTCAGCTCCCGAATGTGGCTGAATCTTCATATGTTAGTTCAATTTATCGACCAGGTATGTCATTCAGAAGGTGGATTTTCTTTTGGATAAAAAAGCTAACTGCTCATGCCACTGGGTCCCGTGCCAGTATTTTTCATGCTTGTCGAGGTATAGTACGTCATGATATGCAGACAGCTGTTTATCTGCTGCCTTATTTAGTTCTTAGTGCTGTCTGTCACGGTACAGAGGAGGCACGACATGGCATAACAGAAGAGATCTTGTCTGTTCTCGATGCTGCAGCTGCAGAGAATAGTGTGTCTGTGATTCACGGAAACATTGGAGGGCAAAGTGATGTTTGCATCCAAGCTGTGTTTACTCTTCTTGATAATCTAGGACAGTGGGTGGACGATGTTGAACGAGGGTTGTCACTTTCTCAATCTGGCCAGTCGTCGTCTTCTAAGCATTTGGTTAAATCAAAGGAATCAAGTTCAAATGTTCAAGTTGATCAGGAGCAACTCCTGGTTCAGTGTAAATATGTATCACAGCTTTTGGATGCAATATCAAAGATCACTCTTGCTAGGGCTTCCTTGAGCTGTCAGGCCTATGCTAGGTCTTTGATGTATTTTGAGTCATATGTACGAGGAAAATCTGGTTCTTTTAACCCTGCAGCTGAGAGGAGTGGCATCTTTGAGGACGAAGATATTTCATATCTCATGGAAATATATAGTTATCTTGATGAGCCTGATGGTATATCTGGCTTGGCATGTTTACGCAAATCCTTGAGGTTACAAGACCAACTTTTGATAAATAAAAAAGCTGGAAATTGGGCAGAAGTTTTGTCCTTTTGTGAACAAGCTTTGCATATGGAATCGAATTCTGTTCAGAGGCATTCAGATGTTCTTAATTGTTTGTTAAATATGTGCCACCTTCAAGCCATGGTTACTCACGTGGATGGTTTAATTACGAGGATTCCTAAGTACAAGAAAACATGGTGCATGCAAGGAGTGCAGGCAGCTTGGAGGCTTGGCAGGTGGGATCTGATGGATGAATACCTTAAAGGTGCTGATGAAGAAGGTCTTCTTTGTAGCAGTTCTGAGAGTAATGCTTCTTTTGACCTGGATGTGGCAAAAATTCTGCAGGCAATGATGAAGAAGAATCAGTTTTCAGTTTCTGAAAAAATTGCTTTGTCCAAACAATCTCTGATTGCCCCTCTTGCTGCTGCTGGCATGGATTCTTACACACGCGCCTATCCATTTGTTGTGAAGCTTCATCTTCTGAAAGAGCTTGAGGACTTCCATAATCTTCTTTTTAATGACTCTTTCTTGGAAAAATCATTTCATGTGGATGATCAGGGATTTTCAGAAGTGATTCAAAATTGGGAGAACCGGCTAAAATTTACTCAGTCATCACTCTGGGCAAGAGAGCCACTTCTTTCCTTTCGAAGACTGGTATTTGGCGCTAGTGGTCTTGGTGCTCAAGTTGGGAACTGCTGGCTTCAGTATGCTAAACTCTGTCGTTCTGCTGGCCATTATGAAACAGCAAACCGTGCAATTCTTGAAGCTCAGGCTTCTGGTGCACCTAATGTTCATATGGAGAAAGCAAAGCTCTTATGGAGCACTAGGCGGTCTGATGGTGCTATCTCTGAATTGCAACAATCTCTTCTTAATATGCCTGTGGAAGTCGTAGGATCTGCTGCAATGTCATCAATAACAAGCCTTTCCTTGGTTCCAATGAATCCAGCTCCTTTAATCTGTGATTCTCAAGTTTTGAATGAGAATAGAGATATTGCAAAGACTCTTCTCCTGTACTCGAGGTGGATACATTGCACTGGGCAAAAGCAAAAGGAAGATGTCATCAATCTTTATTCAAGAGTAAAGGAGCTGCAGCCGAAATGGGAGAAAGGATACTTTTTTATGGCTAGATATTGTGATGAGTTGCTTGTAGATGCCAGGAAACGTCAGGAAGAGAGTATTGAACAAGTTTCGAGAAAAGCTTCATCATCTTCTGCTGCTATTGGCTCTTCAAATTTAAACAACGAGAAGCCCTGGTGGTCTTATGTGCCTGATGTCCTTCTGTTCTATGCGAAAGGACTTCACAGGGGTCACAAGAATCTATTTCAAGCACTTCCAAGGTTGCTAACTTTGTGGTTTGACTTTGGGAGCTTCTACCAAAGAGTTGGTCCATCATCCAACAAGGATTTGAAAAGTGTTCATGGGAAGGTTCTAAGTATCATGAGAGGCTGTTTAAAGGATTTGCCTACATATCAATGGTTGGCTGTACTGCCCCAGTTAGTTTCAAGGATTTGCCATCAGAATGAAGAAACTGTTAGATTGGTCAAACTCATCATTACCTCTGTTGTTCGACAGTACCCCCAACAAGCTCTGTGGATAATGGCTGCAGTTTCCAAGTCTACCGTTCCTTCAAGACGAGAGGCTGCAATGGAGATCATCCAATCTGCAAAAAAAGATTTTAGTCAAGGAAACAGTGGCAATAATTTATTTCTTCAGTTTGCTAGTCTTATTGATCACCTAATCAAGTTGTGCTTTCATCCTGGTCAGCAAAGGGCGAAGAACATTAATATCTCTACAGAATTCAGCACCTTGAAGAGAATGATGCCGTTGGAGATTATTATGCCAATTCAACAATCTATGGTTGTTAATCTACCGACATATGATCTGAGCCTCACTGATTCACTGAGGTCTGACATCTTTTCTGCCACAGAGCTTCCTACAATATCAGGAATAGCAGATGAGGCTGAGATTCTTTCATCACTTCAGCGGCCTAAGAAAATCGTTCTATTGGGTAGTGATGGTATTGAGCGACCATTTCTCTGCAAACCAAAGGATGATCTCCGGAAAGATGCTCGCATGATGGAGTTCACAGCAATGATAAACCGTTTATTATCCAAATATCCAGAAAGCCGCCGGAGGAAGCTCTACATACGCACCTTTGCTGTGATACCTCTGACAGAGGATTGTGGTATGGTAGAGTGGGTTCCCCATACCCGTGGTCTTAGACATATACTGCAAGACGTATATATAACTTGTGGTAAGTTTGATAGGCAGAAGACAAATCCTCAAATTAAGCGAATATATGATCAGTGCCAAGGCAAAACACCTGAAGATGAGATGCTGAAGACAAAAATTCTTCCTATGTTCCCTCCCGTTTTCCATAGATGGTTTTTGAATAACTTTTCAGAACCAGCTGCTTGGTTTCGGGCGCGGATTGCTTATGCACATACAACTGCAGTTTGGTCTATGGTTGGACATATTGTGGGGCTAGGTGATCGGCATGGTGAAAATATTCTTTTTGATTCTACTACGGGTGATTGTGTTCATGTTGATTTTAGTTGTTTATTTGACAAAGGTCTGCAGCTTGAAAAGCCTGAACTGGTGCCCTTTAGGCTAACCCAGAACATGGTCGATGGATTAGGAATCACTGGATATGAGGGTGTTTTCTTGAGAGTTTGTGAAATTACTCTCTCTGTATTGAGGACTCACCGGGATACTTTGATGAGCATACTTGAAACTTTCATTCATGATCCGCTTGTGGAGTGGACAAAATCTCACAAATCCAGCGGTGTTGAAGTTCAGAATCCACATGCTCAGCGAGCCATCAGTAACATTGAGGCGAGGTTACAAGGTGTAGTTGTTGGTGTTGGAGCTGCCCCATCTTTGCCCCTTGCCGTCGAAGGTCAGGCACGTCGATTAATTGCTGAAGCAGTCTCTCACAAAAATCTTGGCAAGATGTACATATGGTGGATGCCCTGGTTTTAG 8184 41.14 MANLSSLVHELRERIAASSSSPPNRADDVGLEVRFRAVLPNLLHAYVVPSSSVNEREVVAVLKLLSHTARNFPGVFYHGRATAVLPVIGRILPFFAEPAIQARHGVIFETVGSLLSLLRTGARDAYRQFFLDAILVVEDILYIASLGSDTSSCVESTNVTLNCFSESLKGIFEDPDHIGDLPESNRPTNGSGILINLTGSKRWQPFATWIIKLLGKCLAEGTVYVEGLISMSDVSAACSLLCYGDADLQMACFDFARIVGLVIDDVVPYQPLIQSISTILSEDKQGLPIFRNSSYDTSIGGCLTVLYSNCCDDVVKLTAADMVGIFSQSLWRTKSMDLKVSLCNAYIRIAKICPPHIWRPEILVDMLSFPEPCFALIDCFQAALSILGPDFVGGSLPPGLGLSELSNKSMENSRVGEKRSLEDLDTFENKRQKIDGKIGSSEVDVLVECKKLHIKICETEETYANNLYKLLVSFVGCLRASSIKADALRPEVSLTALSMLCIAFCRHPETHLSQVIFQEMVSWIPWIYKQAKQGSSISLDISIFLEGIHNILLLPTHLSSCLLSLLSGCDDECTETLSVILKVPWTHSITSTESHKPWKTKSFSVQVASKVTSISKTETDLEILDLSLVDEDDEVRMEAAISIPVIVLWTGFDKLTQLFRRLEILEGEKHEKVKKIIPFSLGFLSCLYGSCHSVNDQNISRCKLFLNINSDRCCQTVDHMLQGFWCSKCDQTVQHDHKLYTNIIQPLDCYEKMNLDRDIVHLMSMFFNLLFDESSEEVQVSCVEIIRRILVHGPRDALHQMKTDWLKCVEFLLLNRKKVIREAFCLQVGSFLEDHILSCFFPEENFSNKRKELKFLDFIKHAMVPTTDPQILDTLLESVANLMTVVDIHSEFFSISLLLLVDHLDNSHITVRMSASRSIHKACRFHFNGKFELVFSKVVHLRNELFDYLSTKLVSRPKIVQEFAEAVLGVETEVLVKKMIPVVLPKLVVSHQNNDQAIESLYELAKCVDTDMVTLIVNWLPKVLAFVLYQANGKELLSALEFYHAQTGSNQEEIFAAALPALLDELVCFVDGGDSDEVSKRLARVPEMILQVARVLTGGDDLPSFLRNHFVGLLNIIDRKMLHAEDVCLQKQALQRIEMLIKLMGFHLSTYVPKLMVLLMHAIGKEVLQSEGLIVLNSFIQQLAKVSPSSIKYVLSQVFAALVPFLERDETSIHLDMVVKILEELVLKNKSILKVHIREFPPLPCISALTEVNRAIHETRGSMSLKDQLRGVVDGLNHDNLNVRYMVACELSKLLNMRSKEVTTLISTEADPDMDVLSLLISSLLRGCAEESRTAVGQRLKLVCADCLGALGAVDPAKVKSFSCQRFKIECSDDDLIFELIHKHLARAFRAAPDTIIQDSAALAIQELLKIAGCKASLDENATASVPPSLKDKGALKIVTCDSSVGGNEMSIRGQRLWGRFCDYVKEIIAPCLTSRFQLPNVAESSYVSSIYRPGMSFRRWIFFWIKKLTAHATGSRASIFHACRGIVRHDMQTAVYLLPYLVLSAVCHGTEEARHGITEEILSVLDAAAAENSVSVIHGNIGGQSDVCIQAVFTLLDNLGQWVDDVERGLSLSQSGQSSSSKHLVKSKESSSNVQVDQEQLLVQCKYVSQLLDAISKITLARASLSCQAYARSLMYFESYVRGKSGSFNPAAERSGIFEDEDISYLMEIYSYLDEPDGISGLACLRKSLRLQDQLLINKKAGNWAEVLSFCEQALHMESNSVQRHSDVLNCLLNMCHLQAMVTHVDGLITRIPKYKKTWCMQGVQAAWRLGRWDLMDEYLKGADEEGLLCSSSESNASFDLDVAKILQAMMKKNQFSVSEKIALSKQSLIAPLAAAGMDSYTRAYPFVVKLHLLKELEDFHNLLFNDSFLEKSFHVDDQGFSEVIQNWENRLKFTQSSLWAREPLLSFRRLVFGASGLGAQVGNCWLQYAKLCRSAGHYETANRAILEAQASGAPNVHMEKAKLLWSTRRSDGAISELQQSLLNMPVEVVGSAAMSSITSLSLVPMNPAPLICDSQVLNENRDIAKTLLLYSRWIHCTGQKQKEDVINLYSRVKELQPKWEKGYFFMARYCDELLVDARKRQEESIEQVSRKASSSSAAIGSSNLNNEKPWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSFYQRVGPSSNKDLKSVHGKVLSIMRGCLKDLPTYQWLAVLPQLVSRICHQNEETVRLVKLIITSVVRQYPQQALWIMAAVSKSTVPSRREAAMEIIQSAKKDFSQGNSGNNLFLQFASLIDHLIKLCFHPGQQRAKNINISTEFSTLKRMMPLEIIMPIQQSMVVNLPTYDLSLTDSLRSDIFSATELPTISGIADEAEILSSLQRPKKIVLLGSDGIERPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDVYITCGKFDRQKTNPQIKRIYDQCQGKTPEDEMLKTKILPMFPPVFHRWFLNNFSEPAAWFRARIAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMVDGLGITGYEGVFLRVCEITLSVLRTHRDTLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQRAISNIEARLQGVVVGVGAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF 2727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46718089 46732024 + Sed0017558.1 Sed04g3826 712429

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed04g3826 2727 CDD PIKKc_ATR 2381 2657 - -
Sed04g3826 2727 Pfam FATC domain 2696 2727 IPR003152 GO:0005515(InterPro)
Sed04g3826 2727 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 9 2726 IPR050517 GO:0000077(PANTHER)|GO:0000723(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)
Sed04g3826 2727 FunFam Serine/threonine-protein kinase ATR 2348 2468 - -
Sed04g3826 2727 ProSiteProfiles FATC domain profile. 2695 2727 IPR003152 GO:0005515(InterPro)
Sed04g3826 2727 SMART pi3k_hr1_6 2411 2716 IPR000403 -
Sed04g3826 2727 Gene3D - 2523 2684 IPR036940 -
Sed04g3826 2727 SMART UME_cls 1102 1208 IPR012993 GO:0004674(InterPro)
Sed04g3826 2727 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2550 2570 IPR018936 GO:0016301(InterPro)
Sed04g3826 2727 Pfam UME (NUC010) domain 1105 1205 IPR012993 GO:0004674(InterPro)
Sed04g3826 2727 ProSiteProfiles FAT domain profile. 1660 2273 IPR014009 -
Sed04g3826 2727 SMART FATC_2 2695 2727 IPR003152 GO:0005515(InterPro)
Sed04g3826 2727 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2384 2697 IPR000403 -
Sed04g3826 2727 Pfam FAT domain 1804 2183 IPR003151 GO:0005515(InterPro)
Sed04g3826 2727 FunFam Serine/threonine-protein kinase ATR 2523 2685 - -
Sed04g3826 2727 Gene3D - 2348 2468 - -
Sed04g3826 2727 SUPERFAMILY ARM repeat 241 1545 IPR016024 -
Sed04g3826 2727 SUPERFAMILY Protein kinase-like (PK-like) 2313 2659 IPR011009 -
Sed04g3826 2727 Pfam Phosphatidylinositol 3- and 4-kinase 2411 2656 IPR000403 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed04g3826 K06640 - - csv:101212807 4823.84
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3826 Sed-Chr4:46718089 Sed12g2440 Sed-Chr12:34072292 9.50E-81 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g215 . . . . . Bpe12g00133 . . . . . . . . Sed04g3826 Cpe04g00609 . Bhi05g01671 Tan02g0643 Cmetu01g0717 . Hepe02g0401 . . Cla02g00402 Cam02g0407 Cec02g0407 Cco02g0423 Clacu02g0410 Cmu02g0406 Cre02g0741 . . . . . Csa07g00128 . Cme01g01220 . Blo13g00493 . . . . . Bma08g00743 . . . Cma11g01361 . Car11g01387 . . . . . . . . . . . . . . . . . Lsi11g01223 . Chy01g00655 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012534 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29