Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0151 ATGGATTTCAATACCCAAATGGTTTTTCTTTCAACCCTTTTTATCTGTTTTCTTTCACTTCAAGTTCAAGCAAACACTTCCAATCTTCAAACTTACATTATTCAACTCCACCCATTGGGCTTAACCAGCTCTGCTTTTCACTCTAAGCTTCAATGGCATCTTTCTTTTCTTGAACAATCTGTTGAAGATGACTCTTCTTCTCGCTTGCTTTACTCTTATTCGAATGCCATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGGTTGAGTATTTGAAGAACTTGCCTGATGTTGTGGCCGTAAGAGCTGATAGAAAGTATGAAATTCAAACAACTTATTCCCATAAGTTTTTGGGGCTTAGTTTAGGCACACAAGGTGTTTGGTATAAGTCCTCAATGGGCCAAGGGGCAATTGTTGGGGTTCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAAAATGCCACCAATTCCACAAAAATGGCAAGGGTCTTGCCAAGAAGGGCAAGATTTCAATTCCTCAAATTGTAACAATAAGCTCATTGGTGCTAAGTTCTTTATCAAAGGACATCATGTCGCTTCGTTGACGCCATTCGATATCGCCCATGAATATGTCTCCCCTAGAGACTCCCATGGCCATGGGACTCACACGTCTTCTACGGCAGCGGGAGCCTCAGTTTCGGAAGCAAGCGTGTTTGGTAATGGAGCCGGCGTGGCGCAAGGGATGGCCCCAGGAGCACACATTGCAGTGTACAAGGTTTGCTGGTTTAGTGGCTGCTATAGCTCTGATATTGTAGCAGCTATGGATTCTGCAATTAGGGATGGTGTTGATATACTCTCCCTTTCGCTCGGTGGCTTCCCGCTTCCATTCTTCGATGATAGTATTGCCATCGGAAGTTTTCGAGCAATGCAGCATGGTATTTCAGTCATTTGTGCAGCAGGAAACAATGGCCCAATTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACTATTGGTGCAAGCACACTCGACCGAACATTCCCAGCTATAGTTCGACTAAGCAATGGAGAAGCCATATACGGCGAATCAATGTACCCTGGAAACAAGTTCAAGCAAGCCACCAAAGAGCTTGAAGTGGTTTATTTGACTGGAGGACAAATGGGAGGTGAACTGTGCTTAAAAGGGTCTCTTCCAAGAGAACAAGTAGAAGGAAAAATGGTGCTATGCGATCGTGGCGTCAACGGAAGATCCGAAAAGGGGCAAATTGTGAAAGAATCTGGAGGAGCTGCCATGATCCTAGCAAATTCAGAGATAAATCTAGAGGAAGACTTGGTTGATGTTCATGTTTTGCCAGCCACATTGATTGGATATGCCAAGGCGAATCAGTTAAAAACTTACATTAACACAACAATCAATCCGAAAGCCAGAATCCAATTTGGAGGAACAGTGATAGGAAGATCAAGAGCTCCATCTGTAGCTCAGTTTTCATCAAGAGGACCAAGTTTCTCTGATTCTTCAACTCTCAAACCTGATGTAATTGCTCCTGGGGTTAACATTATAGCAGCTTGGCCTCAGAATCTTGGTCCAACAGGCCTTCCAGAAGATTCTAGAAGGTCAAACTTCACTGTCATGTCAGGAACTTCCATGGCCTGTCCCCATGTCAGTGGAATTGCAGCTCTTATCCATTCAGCTCATCCAAAATGGACACCAGCAGCCATTAAATCAGCCATAATGACAACTGCTGAAGTTACTGATCATTTTGGTAAGCCAATTCTTGATGACAAAAAACCAGCTAGTGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAAAGCAATTGATCCTGGTTTGGTTTATGATATCAAACCATATGAATATGTAATTCATCTTTGTGCTCTTGGATACACCCATTCAGAAATCTTCATCATAACCCACATGAATGTGAGTTGCCATAAAGCTTTGCAGATGAACAAAGGCTTCAGCCTGAACTATCCCTCGATGTCGGTCGTTTATAAGAACGGGACGATGAGTAAGACGGTCTCCAGGCGGTTGACGAATGTGGGGAGCCCGAATTCCATCTACTCGGTGGAAGTAAAGGCGCCAGAAGGAGTTCGAGTTCGAGTTAAGCCCCAACGCTTGGTGTTCAAACATGTGAACCAAAGTTTGAATTATAAGGTATGGTTTATGTTTGAGAAGGAAAGGAAAGGTAGAAAAGTGAGCTCTACAGAAGGGCATTTGACATGGGTTCATTCTGAAGATAGCAAATACAAAGTTAGGAGCCCAATTGTGGTGATTTGGAAGTAA 2304 43.53 MDFNTQMVFLSTLFICFLSLQVQANTSNLQTYIIQLHPLGLTSSAFHSKLQWHLSFLEQSVEDDSSSRLLYSYSNAMEGFAAQLSETEVEYLKNLPDVVAVRADRKYEIQTTYSHKFLGLSLGTQGVWYKSSMGQGAIVGVLDTGVWPESPSFSDSKMPPIPQKWQGSCQEGQDFNSSNCNNKLIGAKFFIKGHHVASLTPFDIAHEYVSPRDSHGHGTHTSSTAAGASVSEASVFGNGAGVAQGMAPGAHIAVYKVCWFSGCYSSDIVAAMDSAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVICAAGNNGPIQSSVANVAPWITTIGASTLDRTFPAIVRLSNGEAIYGESMYPGNKFKQATKELEVVYLTGGQMGGELCLKGSLPREQVEGKMVLCDRGVNGRSEKGQIVKESGGAAMILANSEINLEEDLVDVHVLPATLIGYAKANQLKTYINTTINPKARIQFGGTVIGRSRAPSVAQFSSRGPSFSDSSTLKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRSNFTVMSGTSMACPHVSGIAALIHSAHPKWTPAAIKSAIMTTAEVTDHFGKPILDDKKPASVFAMGAGHVNPTKAIDPGLVYDIKPYEYVIHLCALGYTHSEIFIITHMNVSCHKALQMNKGFSLNYPSMSVVYKNGTMSKTVSRRLTNVGSPNSIYSVEVKAPEGVRVRVKPQRLVFKHVNQSLNYKVWFMFEKERKGRKVSSTEGHLTWVHSEDSKYKVRSPIVVIWK 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 910793 913324 - Sed0015797.1 Sed05g0151 712777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0151 767 ProSiteProfiles Serine proteases, subtilase domain profile. 112 613 - -
Sed05g0151 767 Pfam PA domain 378 462 IPR003137 -
Sed05g0151 767 Pfam Peptidase inhibitor I9 31 109 IPR010259 -
Sed05g0151 767 FunFam Subtilisin-like protease SBT1.5 136 357 - -
Sed05g0151 767 CDD PA_subtilisin_like 350 476 - -
Sed05g0151 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 763 IPR045051 -
Sed05g0151 767 CDD Peptidases_S8_3 107 580 IPR034197 -
Sed05g0151 767 Gene3D - 343 483 - -
Sed05g0151 767 Gene3D Peptidase S8/S53 domain 137 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed05g0151 767 Gene3D - 630 765 - -
Sed05g0151 767 FunFam Subtilisin-like protease SBT1.9 20 110 - -
Sed05g0151 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Sed05g0151 767 Pfam Fibronectin type-III domain 662 764 IPR041469 -
Sed05g0151 767 SUPERFAMILY Subtilisin-like 123 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed05g0151 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Sed05g0151 767 FunFam subtilisin-like protease SBT1.5 343 483 - -
Sed05g0151 767 Pfam Subtilase family 134 588 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed05g0151 767 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Sed05g0151 767 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Sed05g0151 767 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g0151 Sed-Chr5:910793 Sed06g0192 Sed-Chr6:1399926 6.40E-184 dispersed
Sed01g3943 Sed-Chr1:68564493 Sed05g0151 Sed-Chr5:910793 1.80E-167 transposed
Sed01g4260 Sed-Chr1:70893589 Sed05g0151 Sed-Chr5:910793 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0151 - - - 0.0