Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0158 ATGGGTGAATTTTTTATGCTGGCATCCCTTTTTCATATTATTTTAATTGTTCAACTATTCATGGTTTTCCCTTTTCTATGGCATGTGCATGGCTCATGCATTGAAGCAAGGTCAGAGTCAACGAGTTTTTCATTTATGCCTTCAAAATTACATGGTAACTGGATGTTTAAGTCGTCTTCAGGACCTTCCACTGCTCCTGCACCTTCTCCAGGTCCTAGAAGTACACCCTTACCTCTCCGGCATCATCGGCGGCGGCGTATACGACCTCATATGGCTGCTCCTACCCCATCAAAAGATCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACAGCGGCTCCCTTTGGCTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAACGAGCTCGAAATTGAGATTGCAGAGGGAACTTACTTGGAGCAAAGCCAAGTGAAAATCATGGGCGCAAGTGCAGATAGTCAAAACCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTGGGAGAGAAGTTTGATAATACCACTGCAGTACTGACTTACAGAAGGTTTTGGGATAAAAAGGTGCATTTAAATGTGACCCTTTTTGGCGATTATGAAGTTGTTTACATCAGCTATCCAGGGATTCCTTCTTCACCACCCTACGGAGGGTACCTAGGAAGTGCTCCGAGTGGAAATGTTGGAGATCTTCCTATTACTGCAAACTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTGGTTTTCGTTGGAGCTCTTTCTGTCTTTTTTAAATGGAGAAATGTCGGCAGACCGTCTAGTGCTGTCGGCCCCGTCTTCCCATCGTCAATTAACAAAAAATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCCAGCTCCACATCGGTTTCCTTAATTTCCACAATGCCAACCAGTCTTCTTCGATCTGTTAAAGCATTTGTTCTTTCTGAACTTGAGAAAGCAACAGATAAGTTTAGTTCGAAAAGGATTTTAGGCGAAGGGGGATTTGGACGAGTCTACTTTGGTCTTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACACGGGAAAATCAGAATAGAGACCGTGAATTTATAGCAGAAGTTGAGATGTTGAGTAGACTGCACCATCGGAATCTTGTGAAGCTGATTGGGATATGTATCGATGGGCGCACTCGTTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCCCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGATGCACGATTAAAGATCGCTCTTGGAACAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGTGTAATTCATCGCGATTTCAAAACTAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAGGCAACTGAAGGAAGTGAACATATCTCAACGCGGGTCATGGGAACTTTCGGGTACGTAGCCCCTGAATATGCAATGACAGGGCACCTTCTTGTCAAGAGTGATGTTTACAGCTATGGAGTCGTGCTACTTGAGCTTCTTTCAGGAAGAAAACCGGTGGACATGTCTCAACCACATGGCGGGGAGAACCTCGTAACGTGGGCTCGGCCACTACTGACCAGTAGAGAAGGTTTGGAGCAACTAGTAGACCCTTCTCTAGCTGGTGGTAGTTACGACTTCGATGACATGGCCAAGGTGGCCGCCATTGCTTCCATGTGCGTTCATCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAGCTGATATACAACGACACAGACGAAACGTGCGCAGACTACTGCAGTCCAAAGGAGTCCTCTGCTTGGGATTCGGATTTCAAAGGTGACCCTATGCCATCAGATAACAGTTGGTGGAATGCAGGTGGTCTCACGCCTCGACTAACATTCGGACAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCCCTTGATGATATGGAAAACAGACCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCCATTCGGCATGGAAACAGGTCAGGTCCCTTACGAACCGCTCGAAGCAAGCCTGCCTTCTACAGATTTTCAGGAAGCAGGAGCGAGCACGGAGGACTTCTTTCAAGGCCTTCTTGGAACAACGCATTTTGGATTTAA 2280 45.44 MGEFFMLASLFHIILIVQLFMVFPFLWHVHGSCIEARSESTSFSFMPSKLHGNWMFKSSSGPSTAPAPSPGPRSTPLPLRHHRRRRIRPHMAAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELEIEIAEGTYLEQSQVKIMGASADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNVTLFGDYEVVYISYPGIPSSPPYGGYLGSAPSGNVGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFVGALSVFFKWRNVGRPSSAVGPVFPSSINKKSGLGSALSSSIASSTSVSLISTMPTSLLRSVKAFVLSELEKATDKFSSKRILGEGGFGRVYFGLLEDGNEVAVKLLTRENQNRDREFIAEVEMLSRLHHRNLVKLIGICIDGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGTARGLAYLHEDSNPRVIHRDFKTSNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGGENLVTWARPLLTSREGLEQLVDPSLAGGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSPKESSAWDSDFKGDPMPSDNSWWNAGGLTPRLTFGQASSFITMEYSSGPLDDMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGLLSRPSWNNAFWI 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 952259 958984 + Sed0012162.2 Sed05g0158 712784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0158 759 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Sed05g0158 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed05g0158 759 MobiDBLite consensus disorder prediction 59 81 - -
Sed05g0158 759 FunFam Receptor-like serine/threonine-protein kinase ALE2 431 646 - -
Sed05g0158 759 Gene3D Transferase(Phosphotransferase) domain 1 431 649 - -
Sed05g0158 759 CDD STKc_IRAK 361 631 - -
Sed05g0158 759 Gene3D Phosphorylase Kinase; domain 1 329 430 - -
Sed05g0158 759 FunFam receptor-like serine/threonine-protein kinase ALE2 327 430 - -
Sed05g0158 759 PANTHER OS01G0750732 PROTEIN 104 649 IPR050885 -
Sed05g0158 759 Pfam Protein tyrosine and serine/threonine kinase 358 626 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed05g0158 759 SUPERFAMILY Protein kinase-like (PK-like) 335 631 IPR011009 -
Sed05g0158 759 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g4251 Sed-Chr1:70822313 Sed05g0158 Sed-Chr5:952259 0.00E+00 dispersed
Sed05g0158 Sed-Chr5:952259 Sed12g1762 Sed-Chr12:28729590 3.00E-173 dispersed
Sed05g0157 Sed-Chr5:952259 Sed05g0158 Sed-Chr5:952259 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79119 PF00069 Pkinase 1.60E-45 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0158 - - - 0.0