Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed05g0198 | ATGTTACTGATTAAGTTTGGCTTGATTTCAATTTCTTTTTGTTCATTTTCTTTAATCCTACAGGTGTATGATGTAACAAAATTCCTGGAAGACCATCCTGGTGGTGATGAAGTTTTGCTGTCAGGAGTTGGTAAGGATGCAACCAATGATTTTTTCGATGTCGGGCACAGTAGCACTGCAAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACCATTCCCGCCACAAGAAAGTACACTCCTCCAAAACAGCCTCTATACAACCAAGACAAGACAACAGAATTTGTCATCAAGGTCCTCCAATTTCTAGCTCCCCCACTAATTTTGGGTTTGGCTTTTGGCATCCACCTCTATACCAAAGCAGCTTAA | 381 | 41.21 | MLLIKFGLISISFCSFSLILQVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSTARAMMEEFYVGDIDSSTIPATRKYTPPKQPLYNQDKTTEFVIKVLQFLAPPLILGLAFGIHLYTKAA | 126 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1203376 | 1205793 | - | Sed0004987.2 | Sed05g0198 | 712824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed05g0198 | 126 | PANTHER | CYTOCHROME B5 | 21 | 109 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Sed05g0198 | 126 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 21 | 73 | IPR001199 | - | |
Sed05g0198 | 126 | SMART | Cyt_b5_2 | 11 | 73 | IPR001199 | - | |
Sed05g0198 | 126 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 28 | 35 | IPR018506 | GO:0020037(InterPro) | |
Sed05g0198 | 126 | Gene3D | - | 11 | 76 | IPR036400 | - | |
Sed05g0198 | 126 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 21 | 72 | IPR001199 | - | |
Sed05g0198 | 126 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 21 | 85 | IPR036400 | - | |
Sed05g0198 | 126 | PRINTS | Cytochrome B5 signature | 32 | 46 | IPR001199 | - | |
Sed05g0198 | 126 | PRINTS | Cytochrome B5 signature | 60 | 72 | IPR001199 | - | |
Sed05g0198 | 126 | PRINTS | Cytochrome B5 signature | 22 | 32 | IPR001199 | - | |
Sed05g0198 | 126 | PRINTS | Cytochrome B5 signature | 47 | 54 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g0198 | Sed-Chr5:1203376 | Sed12g0390 | Sed-Chr12:2347770 | 2.70E-39 | dispersed | |
Sed05g0197 | Sed-Chr5:1203376 | Sed05g0198 | Sed-Chr5:1203376 | 5.70E-56 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed05g0198 | K23490 | - | csv:101212882 | 198.364 |