Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed05g0479 | ATGTTGTCTCTTCCAAAGCTTCTTTTCCTCAGCTTCTGCTTTTCCTCGTTTCAAGCTCGAACGTATATTGTATACATGGGGAGTCATTCAAAAGACAAAGTTTCAACTTCATCTCATCACATGAGAATGCTACAAGAAACTATTGGCAGCACTTTTTCTCCACACCGTTTACTCCATAGCTACAAGAGAAGTTTTAATGGGTTTGTGGTGAAGTTGAGTGAAGCGGAAGCACAAAAAATTTCAGAAATGGAAGGTGTGATATCAGTTTTTCGAAATGGAAGAAAAGAACTACACACAACAAGATCATGGGACTTCATGGGTCTGTCTCAACAAGCTAGTCGAGTTCCATCTATAGAAAGTGATATCATTGTTGGAGTATTTGACTCAGGCATCTGGCCCGAATCACCTAGTTTTAACGACACAGGATATAGCCCACCACCACCTAAGTGGAAGGGTATTTGTGAAGTGTCTGCCAATTTCTCTTGTAACAATAAAATCATTGGAGCTCGATCATACCGCAGCGATGGTTTGTATTCACAAACCGATCTCCAAAGTCCAAGAGATTCAGATGGCCATGGAACCCACACAGCATCAACGGTGGCAGGTGGGTTGGTTCGGCAAGCGAGCATGCTCGGTCTCGGCTTGGGCACAGCAAGGGGAGGAGTCCCATCGGCACGAATTGCTGCCTACAAAATATGTTGGTCGGACGGTTGCTACGACGCCGACATTCTTGCTGCATTCGACGATGCCATTGCGGATGGGGTCGACATCATCTCTTTCTCGGTCGGAGGAGGAAGCCCGAAATATTACTTCAACGACTCGATTGCGATCGGAGCTTTCCATGCAATGAAGAAAGGAATCCTTACGTCAATGTCAGCTGGAAACGACGGTCCAGACTTTTTCACAATTAGAAACTTCTCGCCATGGTCTTTGTCTGTGGCGGCTAGCACAACTGATAGGAGATTTTTGACTGGAGTTCAACTTGGAGATGGAACAAATTTCACCGGAGTCACCATTAATACATTTGATCTAAATGGAACACAATATCCATTGGTGTACGCCGGAGATATACCAAACATTACTGCTGGCTTTAATGCATCTAGATCCAGATTTTGCTTGGAAAACTCAGTGGACAAGGAGTTAGTGAGGGGTAAAATTACCCTTTGTGATTCAATTTTATCTCCAAAAGAATTGGGTTCTTTAAAAAATGCAATTGGGATTATAATGCAAGACAGATCTCCAAAAGATCTCACATCCTCTTTTCCCTTGCCTGCCTCCCACCTTGGAACACAGCAAGGTCTCATTTCTTCATATATCAACTTAACAAGCCTTCCAACAGCAACTATACTAAAAAGTACAGAAGGGAAAACATCTACTTTTGTTGCATCTTTCTCTTCAAGGGGTCCAAATCCAATAACACTTGACATTCTTAAGCCAGATTTGAGTGGTCCAGGAGTTGAAATTCTTGCAGCATGGTCTCCCATAGGTTCACCTTCAGGAGCTAAAGATGATAATAGAAATATTTTGTATAATATAATTTCAGGGACTTCAATGTCTTGTCCACATGCTACTGCAGTTGCTGCCTATGTTAAATCATTCCATCCTTCTTGGTCTCCTGCTGCACTTAAATCAGCTCTTATGACGACAGCATTTCCCATGAAAGCAGAGCTAAACTCAGATGCAGAGTTCGCATATGGTTCAGGCCATATAAATCCATTAAGCGCAATAAATCCAGGATTAATTTACAATGCTACAGAAATTGACTATATAAGGTTTCTATGTGGTCAAGGTTATAGCACAAAACAACTCCAACAAGTCTCTGAAGATAACAATACTTGCAATTCTGCAAATAATTTTGACACAGTTTTCAATTTAAATTACCCTTCATTTGCTCTTTCCACAACAATCTCAACTCCAATCAGCCAAGTTTACAAAAGAAGGGTCACAAATGTTGGGTCAGCAAACTCAACATACAAAGCTTCAATATTTGCTCCTTTGGGACTTAATATTATTGTGAATCCTTCTGTACTTTCATTCAAAGCTTTGGGAGAAGAGAAAAATTTTGAGGTTACAATTGAAGGAAGTATTGATAGTGGCATTGCATCAGCTTCCTTGGTGTGGGATGATGGCCTACACAAAGTTAGGAGTCCTATCACTGTCTTTGATGCTAATACATTTGTTACCAATTAA | 2190 | 41.1 | MLSLPKLLFLSFCFSSFQARTYIVYMGSHSKDKVSTSSHHMRMLQETIGSTFSPHRLLHSYKRSFNGFVVKLSEAEAQKISEMEGVISVFRNGRKELHTTRSWDFMGLSQQASRVPSIESDIIVGVFDSGIWPESPSFNDTGYSPPPPKWKGICEVSANFSCNNKIIGARSYRSDGLYSQTDLQSPRDSDGHGTHTASTVAGGLVRQASMLGLGLGTARGGVPSARIAAYKICWSDGCYDADILAAFDDAIADGVDIISFSVGGGSPKYYFNDSIAIGAFHAMKKGILTSMSAGNDGPDFFTIRNFSPWSLSVAASTTDRRFLTGVQLGDGTNFTGVTINTFDLNGTQYPLVYAGDIPNITAGFNASRSRFCLENSVDKELVRGKITLCDSILSPKELGSLKNAIGIIMQDRSPKDLTSSFPLPASHLGTQQGLISSYINLTSLPTATILKSTEGKTSTFVASFSSRGPNPITLDILKPDLSGPGVEILAAWSPIGSPSGAKDDNRNILYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTAFPMKAELNSDAEFAYGSGHINPLSAINPGLIYNATEIDYIRFLCGQGYSTKQLQQVSEDNNTCNSANNFDTVFNLNYPSFALSTTISTPISQVYKRRVTNVGSANSTYKASIFAPLGLNIIVNPSVLSFKALGEEKNFEVTIEGSIDSGIASASLVWDDGLHKVRSPITVFDANTFVTN | 729 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3276797 | 3288867 | + | Sed0004524.1 | Sed05g0479 | 713105 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed05g0479 | 729 | FunFam | Subtilisin-like protease SBT1.5 | 121 | 329 | - | - | |
Sed05g0479 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 514 | 530 | IPR015500 | - | |
Sed05g0479 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 119 | 138 | IPR015500 | - | |
Sed05g0479 | 729 | PRINTS | Subtilisin serine protease family (S8) signature | 188 | 201 | IPR015500 | - | |
Sed05g0479 | 729 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 21 | 718 | IPR045051 | - | |
Sed05g0479 | 729 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 515 | 525 | IPR023828 | - | |
Sed05g0479 | 729 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 15 | 98 | IPR037045 | - | |
Sed05g0479 | 729 | SUPERFAMILY | Subtilisin-like | 97 | 580 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed05g0479 | 729 | Pfam | Subtilase family | 120 | 566 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed05g0479 | 729 | Gene3D | - | 593 | 722 | - | - | |
Sed05g0479 | 729 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 102 | 576 | - | - | |
Sed05g0479 | 729 | CDD | PA_subtilisin_like | 326 | 449 | - | - | |
Sed05g0479 | 729 | FunFam | Subtilisin-like protease SBT5.3 | 14 | 98 | - | - | |
Sed05g0479 | 729 | CDD | Peptidases_S8_3 | 95 | 550 | IPR034197 | - | |
Sed05g0479 | 729 | Pfam | Peptidase inhibitor I9 | 21 | 98 | IPR010259 | - | |
Sed05g0479 | 729 | Gene3D | Peptidase S8/S53 domain | 121 | 589 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed05g0479 | 729 | Pfam | Fibronectin type-III domain | 624 | 720 | IPR041469 | - | |
Sed05g0479 | 729 | Gene3D | - | 319 | 454 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g3026 | Sed-Chr4:41427031 | Sed05g0479 | Sed-Chr5:3276797 | 3.3e-310 | dispersed | |
Sed05g0479 | Sed-Chr5:3276797 | Sed09g0258 | Sed-Chr9:2064825 | 0.00E+00 | dispersed | |
Sed05g0478 | Sed-Chr5:3265826 | Sed05g0479 | Sed-Chr5:3276797 | 0.00E+00 | tandem | |
Sed05g0479 | Sed-Chr5:3276797 | Sed05g0480 | Sed-Chr5:3289585 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed05g0479 | - | - | - | 0.0 |