Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0637 ATGAGTTGGCAGGATCCCGCTGAAGATTGTCTCGGTTGGGCCGCAAGGGATTCGTCTGGGTTTCTATCTCCTTACAAATTCACTCGTAGGGTTCTTGGAGATGATGATGTTTCAATTACAATTACACATTGTGGAGTTTGTTATGCGGATGTAGCATGGACAAGAAATAAATTAGGAGATTCCAAGTATCCTTTGGTGCCTGGGCATGAGATTGCAGGAGTCGTGAAAAATGTTGGCTCAAATGTTTGCCGATTCAAAGTTGGAGATCATGTTGGTGTAGGTACGTACGTGAATTCTTGTAGACAATGTGAATCTTGTGAAAATGATCAAGAAGCTGTTTGCATGAATGGATCCACTTATACCTTTAATGCAATTGATGTGGACGGTACAATTACAAAGGGAGGATATTCCAACTACATAGTCGTCCATGAGAGATATTGCTACAGAATACCCGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATGCTCCAATGATTCGGCATAAGATGAATCAGCCAGGAAAATCTCTTGGAGTGATTGGGCTTGGCGGTCTCGGGCACTTGGCCGTGAAGTTTGGGAAAGCTTTTGGACTGAATGTGACGGTTTTTAGCACTAGCATATCCAAGAAACTAGAAGCCATGAGCCTTCTTGGAGCAGATAAATTTATTCTCTCATCGGACATCAAGGAAATGAAGGCCATGTCTAATTCGCTCGACTTTATTATCGATTCCGCTTCTGGTGATCACCCATTTGATCCATACATGAACACATTGAAGATTGGTGGAGTTATGGTCCTGGTGGGGTTTCCTTCTCAAGTCAAATTTAGTCCTGCCAGCCTGAATTTGGGTTTGAGGACTATTTCTGGTAGCATAACTGGTGGCACTAAGGTGACCCAAGAAATGATCAATTTCTGTGCTGCTAATGGAATCTATCCAAACATAGAAGTCATTCCAATTCAATACTCGAATGAAGCGATCGAAAGGGTAACGAAGAACGATATCAAATACCGATTTGTAATCGATATCCAAGGCTCCCTAAAATGA 1068 42.04 MSWQDPAEDCLGWAARDSSGFLSPYKFTRRVLGDDDVSITITHCGVCYADVAWTRNKLGDSKYPLVPGHEIAGVVKNVGSNVCRFKVGDHVGVGTYVNSCRQCESCENDQEAVCMNGSTYTFNAIDVDGTITKGGYSNYIVVHERYCYRIPDNYPLASAAPLLCAGITVYAPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKLEAMSLLGADKFILSSDIKEMKAMSNSLDFIIDSASGDHPFDPYMNTLKIGGVMVLVGFPSQVKFSPASLNLGLRTISGSITGGTKVTQEMINFCAANGIYPNIEVIPIQYSNEAIERVTKNDIKYRFVIDIQGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4650183 4659801 + Sed0018030.1 Sed05g0637 713263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0637 355 FunFam probable cinnamyl alcohol dehydrogenase 13 184 - -
Sed05g0637 355 Pfam Alcohol dehydrogenase GroES-like domain 33 152 IPR013154 -
Sed05g0637 355 SUPERFAMILY GroES-like 17 183 IPR011032 -
Sed05g0637 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Sed05g0637 355 Gene3D - 165 320 - -
Sed05g0637 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Sed05g0637 355 Gene3D - 13 350 - -
Sed05g0637 355 SMART PKS_ER_names_mod 14 348 IPR020843 GO:0016491(InterPro)
Sed05g0637 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Sed05g0637 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Sed05g0637 355 PANTHER ALDEHYDE REDUCTASE 8 351 IPR047109 GO:0016616(InterPro)|GO:0016616(PANTHER)
Sed05g0637 355 FunFam Cinnamyl alcohol dehydrogenase 165 320 - -
Sed05g0637 355 CDD CAD1 12 349 IPR047109 GO:0016616(InterPro)
Sed05g0637 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3759 Sed-Chr1:66687275 Sed05g0637 Sed-Chr5:4650183 3.20E-161 dispersed
Sed05g0637 Sed-Chr5:4650183 Sed10g0805 Sed-Chr10:5827449 4.20E-98 dispersed
Sed05g0637 Sed-Chr5:4650183 Sed05g0638 Sed-Chr5:4650183 5.20E-173 tandem
Sed01g3758 Sed-Chr1:66687275 Sed05g0637 Sed-Chr5:4650183 3.80E-184 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0637 K00083 - csv:101211438 621.698