Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0770 ATGGATGCGGCAGTGGCGGCGGTAATGGCGGCGGTGGCGTATTTAATTTGGTTCTTGAATATCCAACGGTCGATGAGTGGTCCACGTGTCTGGCCACTATTGGGCAGTCTTCCGGGGCTGATAAAAAACAGTCATCGAATGCATGACTGGATCGCGGAGAATCTACGGTCAACGGGCGGCACGTACCAGACTTGCACGTGCGCCGTTCCGTTTTTGGCTAAGAAGCAGGCGCTGGTGACTGTCACGTGCGACGCGAAGAATTTGGAGCATATATTAAAGACCCGGTTCGAAAACTATCCCAAGGGGCCTAATTGGCAGGCTGTGTTTCATGATTTGCTTGGTGATGGGATCTTCAACTCGGATGGTGACACGTGGCTGTTCCAGCGCAAGGCAGCTGCGCTGGAATTTACCACCAGGACTCTCCGTCTTGCCATGGCTCGTTGGGTTAACCGAGCTATTGAGTCTCGGTTGTGCCCGATTCTGGAGTCGGCTCAGCGTGGTGCTGAGCCGGTAGATGTTCAGGATCTGTTGCTTCGGCTTACATTTGATAACATATGCGGATTGACTTTCGGTAAGGATCCGCAGACTCTGGCTCACGATTTCCCTGAAAACGGGTTTGCTACGGCTTTCGATGCAGCGACCGAAGCCACATTGTGTCGCTTTATTCTGCCTAACTTTATATGGAAGCTGAAGAAATGGCTCGGTTTTGGAATGGAGACGAGGTTAACCCAAAGCCTCAAGCACACGGATCAGTACCTAACCAACATCATCGAGACACGTAGACTCCAACTATCCATATCCAACGAGACCCCTCACGACGACCTATTGTCAAGGTTCATGAAAAAGAAGGAATCCTACTCCGACGCGTTCCTCCAACACGTGGCACTCAACTTCATCCTAGCCGGACGCGACACGTCATCGGTCGCCCTCACCTGGTTCTTCCACCTACTAACCAAAAACCCAACAGTGGAAGAAAAAATCCTCATCGAAATATGCACCGTCCTACTAAACACGCGTGGCAGAGACACGTCCACGTGGACCAACCAGCCGTTCCGGTTTGAAGAGCTGGACCAATTAATTTACCTCAAAGCCGCCTTGTCGGAGACTCTACGCCTCTACCCGTCGGTGCCACAAGATTCAAAATATGTCGTAAACGACGACGTTTTGCCCACCGGAGCTTTCCTTCCGGCGGGTTCTTCCGTTACATATTCGATTTATTCCATTGGACGAATGAAATTCATTTGGGGAGAGGATTGTTTGGAATTCAAACCGGAAAGATGGTTGGATTTAGATGGAAAGAAAATTGAGGTACAAAATGCTTATAAATTTGTTGCATTTAATGCTGGCCCAAGGACTTGTTTGGGTAAAGATTTGGCTTATTTGCAAATGAAGTCCATTGCGGCGGCGCTGCTGCTCCGGCACCGCCTTACGGTGGCGGCCGGCCACCCTGTGGAGCAAAAAATGTCGTTGACTTTGTTTATGAAACATGGGCTCAAGGTTTATTTGAGCCCAAGAGATTTGGGCTCTGTGGTGGAGACAATTGGCAAGACGGCGGCGGCCGCAAGTTGA 1569 50.41 MDAAVAAVMAAVAYLIWFLNIQRSMSGPRVWPLLGSLPGLIKNSHRMHDWIAENLRSTGGTYQTCTCAVPFLAKKQALVTVTCDAKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKAAALEFTTRTLRLAMARWVNRAIESRLCPILESAQRGAEPVDVQDLLLRLTFDNICGLTFGKDPQTLAHDFPENGFATAFDAATEATLCRFILPNFIWKLKKWLGFGMETRLTQSLKHTDQYLTNIIETRRLQLSISNETPHDDLLSRFMKKKESYSDAFLQHVALNFILAGRDTSSVALTWFFHLLTKNPTVEEKILIEICTVLLNTRGRDTSTWTNQPFRFEELDQLIYLKAALSETLRLYPSVPQDSKYVVNDDVLPTGAFLPAGSSVTYSIYSIGRMKFIWGEDCLEFKPERWLDLDGKKIEVQNAYKFVAFNAGPRTCLGKDLAYLQMKSIAAALLLRHRLTVAAGHPVEQKMSLTLFMKHGLKVYLSPRDLGSVVETIGKTAAAAS 522
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 6106634 6108583 + Sed0005036.1 Sed05g0770 713396
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0770 522 FunFam Cytochrome P450 19 508 - -
Sed05g0770 522 SUPERFAMILY Cytochrome P450 22 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 Pfam Cytochrome P450 26 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 CDD CYP86A 65 498 - -
Sed05g0770 522 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PANTHER CYTOCHROME P450 17 498 - -
Sed05g0770 522 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0770 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1153 Sed-Chr1:8561665 Sed05g0770 Sed-Chr5:6106634 9.00E-190 dispersed
Sed05g0770 Sed-Chr5:6106634 Sed09g0050 Sed-Chr9:409158 1.30E-217 dispersed
Sed05g0770 Sed-Chr5:6106634 Sed04g2239 Sed-Chr4:36137951 5.80E-221 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0770 K15398 - csv:101216733 852.818