Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0877 ATGGAACCAAACAAACTCCTCCTCACATTCCTCGCCGCTCTACTAATCCTCCTCTACACCAACCTCCGGCGACGCCGTCAACGGCGGCGACCGCCACTTCCACCGGGCCCCACCGGCGTTCCCCTCCTCGGAAACCTCCCATTTCTCGACCCGGAACTCCACACCCACTTCGCCGAACTGGGCCGAAAATACGGCCCAATAACAAAACTCCAACTCGGTCAAAAACTCGGCATCATCGTCAACTCACCCGCCCTCGCACGTGAGATCCTGAAAGACCATGACGTCACGTTCGCCAACCGCGACGTCCCACGTGCCGGCCGAGCCACCACGTACGGCGGCTCCGACATCGTTTGGACGCCGTACGGGCCGGAGTGGCGAATGCTGCGTAAGGTCTGCGTCATCAAGATGCTCAGCAATGCCACGTTGGATTCGGTCTACGAGCTCCGCCGCAGGGAGGTGAGGAAAACCGTGGCCCACTTGAACCGGCGGGCCGGTTCGCCGGTCAACGTGGGAGAACAGGGGTTTTTGACGGTTTTTAACGTGGTTACGAGCATGTTGTGGGGCGGGACGGTCGAGGGGGACGAGAGGGACCGGGTTGCGGCGGAGTTTAGGGAAACGGTGTCGGATGTAACGGAGTTGTTGATTCGGCCCAATGTTTCCGACTTTTTTCCGGTTCTGGGCCGGTTCGATTTTCAGGGTATTGAGAAGCAGATGCGTGGGTTGGCTGCGAGATTTGATGCTATTTTTGAAAAGATGATTGATCAACGGCTCAGATTTGGCGGTGGCGATGATGAAAAGAAGAATGATTTCTTGCAATTTTTGCTTAAGTTGAATCGTGAAGGTGACTCTAAAACTCCTCTAACGATGATCCACGTCAAAGCCTTGCTCATGGATATGGTGGTGGGTGGGACGGACACGTCATCAAACGCCGTAGAGTTTGCAATGGCGGAGATGATGAATAAACCAAAAACTCTAAAGAAAGCACAAGAAGAATTAGCCATAGTGGTGGGAAAAGAAAACATAGTAGAAGAATCCCACATTCAAAATCTACCATATCTCAAAGCCATAATGAAAGAAACATTGCGTTTGCATCCAATCCTACCGCTGCTAGTGCCGCACTGCCCGAGCGAGACCACCACGGTGTCCAATTACACTATCCCGAAGGGCTCTCGAGTGTTCATCAACGTCTGGGCCATTCAGCGAGACCCCGACCAATGGGAAAACCCGTTGGAGTTCGACCCGGAGAGGTTCATGGAGAGTAAGTGGGATTATAGTGGGAATGATTTTCGGTACTTCCCGTTCGGGTCCGGAAGAAGAAACTGTGCAGGGATCGCCATGGCGGAAAGAACGTTCATGTATTTGCTTGCTACGCTTTTGCATTCGTTTGATTGGAGATTGGGAAAAGGTGAGAAGTTGGATCTTGAGGAGAAATTTGGGATTGTTTTGAAGTTGAAAACGCCTCTTGTTCTTGTTCCAACGCCTAGGCTATCTAACCCCATTCTCTATGAATAA 1512 52.12 MEPNKLLLTFLAALLILLYTNLRRRRQRRRPPLPPGPTGVPLLGNLPFLDPELHTHFAELGRKYGPITKLQLGQKLGIIVNSPALAREILKDHDVTFANRDVPRAGRATTYGGSDIVWTPYGPEWRMLRKVCVIKMLSNATLDSVYELRRREVRKTVAHLNRRAGSPVNVGEQGFLTVFNVVTSMLWGGTVEGDERDRVAAEFRETVSDVTELLIRPNVSDFFPVLGRFDFQGIEKQMRGLAARFDAIFEKMIDQRLRFGGGDDEKKNDFLQFLLKLNREGDSKTPLTMIHVKALLMDMVVGGTDTSSNAVEFAMAEMMNKPKTLKKAQEELAIVVGKENIVEESHIQNLPYLKAIMKETLRLHPILPLLVPHCPSETTTVSNYTIPKGSRVFINVWAIQRDPDQWENPLEFDPERFMESKWDYSGNDFRYFPFGSGRRNCAGIAMAERTFMYLLATLLHSFDWRLGKGEKLDLEEKFGIVLKLKTPLVLVPTPRLSNPILYE 503
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 7039009 7042347 - Sed0015065.1 Sed05g0877 713503
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0877 503 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 Gene3D Cytochrome P450 18 490 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 SUPERFAMILY Cytochrome P450 34 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PANTHER OS08G0547900 PROTEIN 8 503 - -
Sed05g0877 503 CDD CYP76-like 62 492 - -
Sed05g0877 503 FunFam Cytochrome P450 - like protein 22 489 - -
Sed05g0877 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 Pfam Cytochrome P450 34 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g0877 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3971 Sed-Chr1:68846365 Sed05g0877 Sed-Chr5:7039009 1.10E-63 dispersed
Sed05g0534 Sed-Chr5:3927023 Sed05g0877 Sed-Chr5:7039009 1.50E-80 dispersed
Sed05g0877 Sed-Chr5:7039009 Sed06g2268 Sed-Chr6:46237609 6.70E-89 dispersed
Sed01g3970 Sed-Chr1:68837036 Sed05g0877 Sed-Chr5:7039009 5.40E-211 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0877 - - - 0.0