Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g0937 ATGCCGAAGGGATTGAAGAGTAAATGTCAGTCTACTTCTCATCAGTTTTTGAGGGAAAAGGCAAAGAGCCTTGTTAATGACCTTCAAGGGATATTCACTAATCTTCAATCTGCAAGGAAGGAGAATCGTACTACAGATGTCACTGTCTTGGAGGAGCAAGTGCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATCAACCCTCCCCTGCCTCTTCATTTGTTGAGGGCAGTCTTGGATCGTTCTCGCAAGAATTAGCACGTCTTCTTGAGGATTGTGAAGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGGAAGAGCCTGATCTTCATCGCGTTCTTGCTAGCAATCCGTCAGATTTTCATCATAATGGTTTTGGTATTCCGGAGCTCCAACCGCAAAGTTTTGTTGGGTTTGAAGAGTGCAAAGTCTCTCCTCCAGTTCTACAGAATTACTCATTTTACAAATCAGACATGGCTACTCAGTCTAATACTCAAGATTTCAAATTAGATCAAAACTTGATCAGTAAGGATGATATGCCTTCTTTGGATTGCCACTTATTGGATTTTCATCAACAGTTGGACTGTGGGGTGCTTATTGGGGCAAATGTTGCTGGAGACTTTAGTCAGGACACAAAGCCCAGCATTCTCCCAAATATCTCGCCCCCACCGTCTGCTTTTATGGGGCCAATATGTGCTCTTTGGGACTGTTTCAGACCTGCTCAAGGATCTAAATGGTGCCAGGATTATTGCAGTAGCTGCCATTCTATGCTTGCAATAAATGAAGGCCTTCCAGGAATGACTCCAATATTGCGCCCTGGCGGCATTGGCTTACAGGATGGTCCACTGTTTGCTGCTCTTCTTGCAAAGACTTTGGCCAAAGAAGTTGGAATACCGGTATGTGATGGTGCTGCAAGAAAAAAATCTCCATGGAATGATCCTGAGCTTTTCGATATTTCATTTCTGGAGGGTGAGACAATCAGGGAATGGCTCTATTTCGACAAGCCTAAACGGGCCTTTGAGAGTGGTAACCGAAAGCAAAGGTCATTACCGGATTATAAAGGCCGTGGTTGGCACGAATCCAGGAAGCTGGTGATGAAGGAGTTTGGTGGTCAGAAGAAGTCCTATTACATGGATCCACAGCCATCAAGCTCACTTGAATGGCATTTGTACGAATATGATGTCAGCAATTATGATTCATTTTCATTATATAGGCTAGAACTCAAGCAAACTAATGCAAAGAAGAGTTCAAAGGGAAAACTAATAGCCGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCTGAAGGGCCTGTCGAGCTTGGACAATCCGTTAAAGGTGCGTCGAGTAAGGCGAATAATAAGGCTGATACCGTAAATATCAATCTTGCTCCGAACCATGTCTAA 1422 44.09 MPKGLKSKCQSTSHQFLREKAKSLVNDLQGIFTNLQSARKENRTTDVTVLEEQVHQMLREWNAELNQPSPASSFVEGSLGSFSQELARLLEDCEEQDDATSTLAEPKEEPDLHRVLASNPSDFHHNGFGIPELQPQSFVGFEECKVSPPVLQNYSFYKSDMATQSNTQDFKLDQNLISKDDMPSLDCHLLDFHQQLDCGVLIGANVAGDFSQDTKPSILPNISPPPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSMLAINEGLPGMTPILRPGGIGLQDGPLFAALLAKTLAKEVGIPVCDGAARKKSPWNDPELFDISFLEGETIREWLYFDKPKRAFESGNRKQRSLPDYKGRGWHESRKLVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDVSNYDSFSLYRLELKQTNAKKSSKGKLIADPLADLQKKMGRLTAEGPVELGQSVKGASSKANNKADTVNINLAPNHV 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7553167 7557511 - Sed0005904.1 Sed05g0937 713563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g0937 473 MobiDBLite consensus disorder prediction 449 473 - -
Sed05g0937 473 PANTHER TRANSCRIPTION FACTOR VOZ1 1 468 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(InterPro)|GO:0048578(PANTHER)
Sed05g0937 473 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g0937 Sed-Chr5:7553167 Sed10g0277 Sed-Chr10:1603744 2.60E-135 dispersed
Sed05g0937 Sed-Chr5:7553167 Sed05g0938 Sed-Chr5:7554109 1.20E-185 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
38485 None None None None Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g0937 - - - 0.0