Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1022 ATGGCGACGAGTTTGGTTCGCTCTCACAGGCCCGAGTTTCTCACCATCGCCGCCGCCGTGGTTGCTGTCGGCGTCGCCGCTGCCTACTACTTCTGCGTCGCCAAGAAATCAAAACCCAAAGGTTGTTTGGACCCTGATAATTTCAAGGAATTTAGACTGGTTAAACGCACGCAGCTTAGCCATAATGTGGCAAAGTTCAGATTCTCTCTTCCGACCCCAAGCTCTGTCTTGGGGCTGCCAATTGGGGAGCATATGAGTTGCAGAGGAAAAGATAGTGAAGGTGAAGATGTTGTGAAACCTTACACTCCAACCACTTTGGATACAGATGTTGGGTACTTTGATTTGGTCATTAAGATGTATCCACAAGGGAGAATGTCCCATCATTTCCGCGAGATGCTAGAAGGTGATTACTTGGCTGTGAAAGGTCCTAAGGGACGTTTCAAATATGAGCCTAATGAAGTTGAGGCTTTTGGGATGCTTGCTGGAGGCACGGGCGTAACTCCGATGTTCCAGGTTACAAGAGCAATACTTGAAAATCCAGTGGACCGCACTAATATTCATCTTATTTACGCTAATCTTACTTATGAAGACATTCTCTTAAAGGAAGAACTGGATAGTCTTGCAACTAGATTCCCTTCCCGCTTTACCATCTACTATGTTCTTAATCAGCCTCCTGAGGGATGGGATGGTGGTGTTGGCTTTGTGACCGAGGAAATGATACGCCAGCATTGTCCCGCGCCATCCCCAAACGTTCGGATCTTGAGGTGCGGACCACCCCTCATGAACAAAACTATGGCTACGTACCTCAAGAGCATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTGA 849 47.47 MATSLVRSHRPEFLTIAAAVVAVGVAAAYYFCVAKKSKPKGCLDPDNFKEFRLVKRTQLSHNVAKFRFSLPTPSSVLGLPIGEHMSCRGKDSEGEDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMLEGDYLAVKGPKGRFKYEPNEVEAFGMLAGGTGVTPMFQVTRAILENPVDRTNIHLIYANLTYEDILLKEELDSLATRFPSRFTIYYVLNQPPEGWDGGVGFVTEEMIRQHCPAPSPNVRILRCGPPLMNKTMATYLKSIGYTSQMQFQF 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8895169 8902691 + Sed0004439.1 Sed05g1022 713648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1022 282 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 138 276 IPR039261 -
Sed05g1022 282 CDD cyt_b5_reduct_like 51 282 - -
Sed05g1022 282 Gene3D - 140 282 IPR039261 -
Sed05g1022 282 Gene3D Translation factors 41 139 - -
Sed05g1022 282 PANTHER NADH-CYTOCHROME B5 REDUCTASE 17 282 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Sed05g1022 282 Pfam Oxidoreductase NAD-binding domain 159 265 IPR001433 GO:0016491(InterPro)
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 196 207 - -
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 135 149 - -
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 99 106 - -
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 77 88 - -
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 158 177 - -
Sed05g1022 282 PRINTS Cytochrome B5 reductase signature 252 260 - -
Sed05g1022 282 FunFam NADH-cytochrome b5 reductase 41 140 - -
Sed05g1022 282 SUPERFAMILY Riboflavin synthase domain-like 42 152 IPR017938 -
Sed05g1022 282 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 46 150 IPR017927 GO:0016491(InterPro)
Sed05g1022 282 FunFam NADH-cytochrome b5 reductase 140 282 - -
Sed05g1022 282 Pfam Oxidoreductase FAD-binding domain 51 149 IPR008333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2083 Sed-Chr3:14969593 Sed05g1022 Sed-Chr5:8895169 2.00E-114 dispersed
Sed05g1022 Sed-Chr5:8895169 Sed11g0102 Sed-Chr11:949917 1.70E-49 dispersed
Sed05g1022 Sed-Chr5:8895169 Sed10g1434 Sed-Chr10:30517212 3.40E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1022 K00326 - csv:101219272 499.975