Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1091 ATGGCTTCCTTCAAACCCATTGCCTTCTTTTTGCTTGTCGGGTTCTTGGTTGGAGCTTCTAAAGCTCAGCTCTGTCCCACGTTTTACGACGAATCCTGCCCTTATGTATTCGACATTGTGCGAGACGTCGTGGAGCGAGCTTTGCAGACCGACGACCGTGCTGGTGCTAGGCTGATTCGTCTTCACTTTCACGACTGCTTTGTTGACGGTTGCGATGGGTCGGTTTTACTAGTAGACCAACCGGGCGTAGTGAGCGAACTAGCTGCTCCTGGAAACGCGAATATTACAGGGTTTAACATTGTTAATGACATCAAAGCTGCTCTGGAAAAGGCTTGTCCTGGAGTTGTGTCTTGTGCCGACATCTTAGCCATAGCTTCTGTAGAAGCTGTTTCCTTGGCAGGTGGGCCCTGTTGGGAGGTTCAACTTGGAAGAAGAGATAGTCGATCGGCCAACTTACAAGGGGCGATCAATGGGCTTCCAAGTCCCTTTGAGAATGTCACAGTTCTTAAAAGAAAGTTTCGTGCTGTGAATCTTGATTCTACTGATCTTGTTGCTTTATCAGGTGCTCACACATTCGGGCGGTCAAGATGTCGGTTCTTCGACCGACGACTGAATGTTTCAGCCCCAGACAGAACACTGGACGCCTCATACGCAGCACAGCTGCGTCGAGTTTGTGCGAGTGGCAGAGACACTTTTGTTAATCTCGATCCGACCACACCCAACGGTTTTGACAAAAACTACTACACTAATCTTCGGTCCAACTTTGGCCTTCTCGGTAGCGACCAGGTCCTCTTCTCCGAAGGAGACAGGGAAACTATCCAAATCGTAAACTTGTTCGCGAGCAACCAACAACAATTCTTCGACAGCTTTGGCAAGTCCATGATCAATATGGGAAATTTCAAGCCTAAAACTGGAAACCAGGGAGAAATTAGATCCAATTGCAGAAAACTCAATTAA 957 47.86 MASFKPIAFFLLVGFLVGASKAQLCPTFYDESCPYVFDIVRDVVERALQTDDRAGARLIRLHFHDCFVDGCDGSVLLVDQPGVVSELAAPGNANITGFNIVNDIKAALEKACPGVVSCADILAIASVEAVSLAGGPCWEVQLGRRDSRSANLQGAINGLPSPFENVTVLKRKFRAVNLDSTDLVALSGAHTFGRSRCRFFDRRLNVSAPDRTLDASYAAQLRRVCASGRDTFVNLDPTTPNGFDKNYYTNLRSNFGLLGSDQVLFSEGDRETIQIVNLFASNQQQFFDSFGKSMINMGNFKPKTGNQGEIRSNCRKLN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10127628 10132090 - Sed0023021.1 Sed05g1091 713717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1091 318 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 Pfam Peroxidase 40 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 PANTHER PEROXIDASE 72-RELATED 17 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1091 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Sed05g1091 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Sed05g1091 318 Gene3D - 28 318 - -
Sed05g1091 318 Gene3D Peroxidase, domain 2 160 297 - -
Sed05g1091 318 FunFam Peroxidase 160 297 - -
Sed05g1091 318 FunFam Peroxidase 27 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1089 Sed-Chr5:10037705 Sed05g1091 Sed-Chr5:10127628 3.10E-108 dispersed
Sed05g1091 Sed-Chr5:10127628 Sed05g1093 Sed-Chr5:10219872 2.60E-99 dispersed
Sed05g1090 Sed-Chr5:10095695 Sed05g1091 Sed-Chr5:10127628 1.80E-111 tandem
Sed05g1091 Sed-Chr5:10127628 Sed05g1092 Sed-Chr5:10191295 8.20E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1091 K00430 - csv:101212717 516.538