Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1095 ATGGCTTCTCCAAAAGTTATAGCCTTTGTTGTCGGGGTAGCAGCTTTGATGCTGGCCGCAACCTCTCACGCTCAGCTTAGCCCTCTTTTCTACGCCTTGACATGCCCTCGGCTGTCTTCGATTGTTCATACCGCAGTCTTAACAGCTCTACGAACCGATGATCGAGCAGCTGCCAAACTCATTCGTCTTCACTTTCATGACTGCTTTGCTAATGGATGTGATGCGTCCGTGCTACTAGAGGACGTGCCTGGAGTCATTGATAGTGAACTAAACGCAGGCCCGAACAATGGGATCCAAGGACTGGACATTGTTGACAGCATCAAAGCAGCAGTTGAAGATGTTTGCCCTGGTGTTGTTTCGTGTGCTGACATTTTGACCCTCTCGTCTCAAGTATCTGTTCAATTGTCTGGAGGGCCAATTTGGGTATCTCCATTGGGAAGAAAAGATAGCAGAATAGCCAACAGGGCCGCAGCCGCAAATATCCCGGGTCCAAGTCTAACTCTAGATGTACTCAAAGACCGATTTGCAGCTTTTGGGCTTGGTTCTACCGACCTTGTTGCTCTTTCAGGAGCACACACGTTCGGTAGAGCCAGATGCCTTTTCTTCAACGGTCGGTTCGACAACTTCAACAACACCGGCCTACCTGACCCCACGTTGGACCCTGTGTACAGGGAGCAGCTACGTCAAGCTTGCACCACCACAACAACACGAGTGAATCTTGACCCGACCACACCAAACACATTCGACAAAAACTACTACAACAATCTTCAAGACCTTAAAGGACTTCTTCAAAGTGATCAAGAGCTTTTCTCCACTCCTGGGGCTGATACCACTGCCATTGTCAACGCCTTTGCCAACAACCAGTTTCTGTTCTTTGATCAATTTCGGATTTCCATGATCAGAATGGGAAGTCTCAGCCCTCCACCTGGCACCCCATCCGAAATCAGGTTGAACTGTAGGAAGGTCAACTCATAA 975 48.82 MASPKVIAFVVGVAALMLAATSHAQLSPLFYALTCPRLSSIVHTAVLTALRTDDRAAAKLIRLHFHDCFANGCDASVLLEDVPGVIDSELNAGPNNGIQGLDIVDSIKAAVEDVCPGVVSCADILTLSSQVSVQLSGGPIWVSPLGRKDSRIANRAAAANIPGPSLTLDVLKDRFAAFGLGSTDLVALSGAHTFGRARCLFFNGRFDNFNNTGLPDPTLDPVYREQLRQACTTTTTRVNLDPTTPNTFDKNYYNNLQDLKGLLQSDQELFSTPGADTTAIVNAFANNQFLFFDQFRISMIRMGSLSPPPGTPSEIRLNCRKVNS 324
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 10280518 10282814 - Sed0019646.1 Sed05g1095 713721
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1095 324 PANTHER PEROXIDASE 72-RELATED 15 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 Pfam Peroxidase 44 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed05g1095 324 Gene3D - 30 323 - -
Sed05g1095 324 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Sed05g1095 324 Gene3D Peroxidase, domain 2 162 302 - -
Sed05g1095 324 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1095 324 FunFam Peroxidase 162 302 - -
Sed05g1095 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3344 Sed-Chr1:62306476 Sed05g1095 Sed-Chr5:10280518 2.20E-94 dispersed
Sed01g3345 Sed-Chr1:62314685 Sed05g1095 Sed-Chr5:10280518 1.50E-129 dispersed
Sed05g1092 Sed-Chr5:10191295 Sed05g1095 Sed-Chr5:10280518 4.50E-102 dispersed
Sed05g1093 Sed-Chr5:10219872 Sed05g1095 Sed-Chr5:10280518 2.90E-101 dispersed
Sed05g1095 Sed-Chr5:10280518 Sed05g1097 Sed-Chr5:10375138 1.10E-71 dispersed
Sed05g1094 Sed-Chr5:10241298 Sed05g1095 Sed-Chr5:10280518 2.50E-93 tandem
Sed05g1095 Sed-Chr5:10280518 Sed05g1096 Sed-Chr5:10334704 1.70E-130 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1095 K00430 - csv:101211752 489.189