Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1097 ATGGAAGCCTCAAGCCACAGATTAAAGGGTCGTTTTGCTTTGCTTATGATCCTTTTTCTCATGCTATGTGGTGCCACAAGATCACAATTAACCGTGGATTTCTATAAGAGTTCATGTCCAAATCTTCTAAAAATCGTTAGGAGAGAAGTTTTTAGTGCCATAAAGACTGAGATGCGAATGCCGGCTTCGCTTCTTCGTCTTCACTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCAGTGCTGCTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCAAACATCAATTCTCTTAGAGGGCTTGAAGTTATGGATACAATCAAAAGCGCAGTTGAAAATTCTTGTAGCGGAGTTGTATCATGTGCTGATATATTAACCATAGCTGCAAGAGATTCTGTTCTTCTGAGTGGAGGACCAACGTGGAGGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAACCAAACCGGAGCGAATCAGGGACTTCCCGCTCCATTTGAAAGCCTCGATGGTATCGTCAACAAGTTCACGGATGTCGGCCTTGATCTCACTGATGTCGTTGCTTTATCTGGAGCCCACACAATTGGGTTCGCAAGGTGTGCGATGTTCAACAACAGGCTCTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAACCATGGAGACCACAATGGTATCTGATCTGCAAGGTCTATGCCCTCTAACCGACGATGGCAACAAAACCACGGTTCTGGACCGAAACTCCACCGATTTATTCGACAACCATTACTACAAGAACTTGCTCAACCAAAAGGGCCTCTTGGAATCTGACCAAATTCTGTTCTCAAGTGATGCAGCTCAAACCACCACCAAAACCTTGGTCCAAGCTTACAGCTCAAACACCACGCTTTTCTTTCAAGACTTTGCCAAAGCCATGATCAAGATGGGAAATATAGCCCCGCTCACTGGCTCCACTGGACAAATCCGGAAGAATTGTAGAGTCATTAATTCTTAA 996 44.98 MEASSHRLKGRFALLMILFLMLCGATRSQLTVDFYKSSCPNLLKIVRREVFSAIKTEMRMPASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVMDTIKSAVENSCSGVVSCADILTIAARDSVLLSGGPTWRVLLGRRDGLVANQTGANQGLPAPFESLDGIVNKFTDVGLDLTDVVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMETTMVSDLQGLCPLTDDGNKTTVLDRNSTDLFDNHYYKNLLNQKGLLESDQILFSSDAAQTTTKTLVQAYSSNTTLFFQDFAKAMIKMGNIAPLTGSTGQIRKNCRVINS 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10375138 10377106 - Sed0026218.1 Sed05g1097 713723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1097 331 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed05g1097 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Sed05g1097 331 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PANTHER PEROXIDASE 72-RELATED 15 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 Gene3D - 34 330 - -
Sed05g1097 331 FunFam Peroxidase 33 175 - -
Sed05g1097 331 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 FunFam Peroxidase 164 309 - -
Sed05g1097 331 Gene3D Peroxidase, domain 2 164 309 - -
Sed05g1097 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed05g1097 331 Pfam Peroxidase 46 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1095 Sed-Chr5:10280518 Sed05g1097 Sed-Chr5:10375138 1.10E-71 dispersed
Sed05g1097 Sed-Chr5:10375138 Sed10g0374 Sed-Chr10:2256507 1.70E-96 dispersed
Sed05g1096 Sed-Chr5:10334704 Sed05g1097 Sed-Chr5:10375138 3.80E-72 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1097 K00430 - csv:101211257 538.11