Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1633 ATGTGGTTATCAAAATACAGTCCAGAGAGAAATGAGAGAGTAAATAATAGTAATGTGAATGGAATTGTTGGAGTTGCAATTGACAAAGACAAAGGAAGCCAAGGAGCACTGAAATGGGCAATTGATCATTTGCTTCAAAGAGGCCAAACTGTTTTCCTCATTCATGTCAAACTCAGATCTACTTCTCTTTCTAATTCCCAAAAGATTATTAGCACTGAACACGGCGTCAAAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGAAAGGATATTCAATGCAAAGATGTTGTGTTGGAAGATACAGACATAGCGAAGGGCTTAATTGAGTATGCTACAAATACAGCCATAGAGAACATGGTTGTTGGAGCTTCAACAAAAACTGGCTTTCTAAGCAAATTCAAGGCAACTGATGTTCCAAGCAGTGTAATAAAAGGAGCACCAGATTTTTGCAGTGTGTATGTCATTTCTAAAGGAAAGATCCAATCGATGCGTTCGGCATCTCGTCCCGCTCCGGCCGTAAATCCTCTACGATCTCAGTTAGCGCAACAAAGCGCAAAATCCGAAACACCCGACCTCAATGTTGTTCCTCACTCAGCAAGTGTAAGAGTACCTATGGAAAAGCCACCCCTTGATCAGCCAAGTAAACCACAGGATGAGATAGAACTCATGAGGTCACCATTCACAAGGAAAGGATATAACTACAGACCATCATATGGAGATTTGTCTATGCAAGATTCAGACATATCGTTTGTTAGCTCAGGAAGACCGAGCATCGATCGTATGTTTCCTTCACATTATGACTTCCAAGATATGGGAGGAAGAGCGACCCCGCCGCGGATGTCGAATAGTGCAGATTTTGATTTCAATAACAGCTTCGAGTCTCTTCCGATGGGACGGATGTCGCTCGATTTGAACTTCCCATACGAGTTCTCTTCGATATCGCAAGATAGTGACAGAATGTCAATCTCATCACAGTCTATGGAGGACGTCGAGGCCGAGATGCGAAGGCTCAAGCTAGAACTCAAGCAAACCATGGAAATGTATAGTACAGCCTGCAAGGAAGCACTTACAGCGAAGCAAAAGGCGGTCGAGCTACAACGCTGGAAATTTGAAGAAGAACGGAGATTAGAAGAGGCGAAATTAGCCGAGGAAGCTGCATTGGCGATAGCTGAACAGGAGAAGGCGAAGTCGAAAGCAGCCATCGAGGCAGCAGAAGCCGCTCGGAGAATTGCAGAATTGGAAGCACAGAAAAGAATGAAGGCTGAAAGGAAAGCACTCCAAGAATCTGAAGAGAAAAACAAGGCATTTAATGCATTGGCACAAACGGACAACAGGTATCGAAAGTATACGATTGAGGAGATCGAAGAGGCAACCGAATTCTTTTCCGAATCTCGTAAGATTGGAGAAGGTGGTTACGGTCCTGTTTACAAGTGTGATCTTGATCACACTCCTGTTGCTATAAAGGTTCTACGTCCCGATGCGACTCAAGGCCGATCGCAGTTTAAACAAGAGGTAGAAGTACTATGTTGTATACGCCATCCAAACATGGTTCTCCTCCTCGGAGCTTGCCCCGAGTACGGCTGCTTGGTCTATGAGTTCATGGCTAATGGGAGTTTAGAAGACCGGCTTCTACGACAAGGGAACACGCCTCCACTTTCTTGGCAACTCAGGTTTAAAATTGCAGCTGAAATCGGAACATCATTGTTGTTCCTACACCAAACAAAGCCAGAGCCACTCGTGCATCGTGATCTCAAACCAGCTAACATTCTACTCGATCGTAACTTTGTCAGTAAGATCAGCGATGTTGGCTTGGCCAGGCTTGTACCTCCATCGGTCGCCAACAACGTAACGGAGTATAGGATGACATCGACTGCAGGAACGTTTTGCTACATCGATCCGGAGTATCAACAGACAGGCATGCTTGGTGTAAAATCAGACATATACTCACTAGGCATCATGTTTCTCCAAATGATAACTTCTAGACCACCAATGGGATTGACCCACTATGTCGAAAAAGCTATCGAAAATGGGACGTTTGCAAGTATTCTCGATCCAGTGGTGACCGATTGGCCGGTTGAAGAAGCATTGTCGTTCGCCAATTTATCGCTCAAGTGTGCCGAGTTGAGACGTAAAGATAGGCCTGATCTTGGAAAGGAAATCCTTCCAGAGCTTAACAGGTTGAGAGATATTGCAGAAGATTTAATGCACCCAACACTCATGGGAGGCATAAGCTCCTCTCGCAGCAACAGCCAAGTTTCTCTACATTTGGGAGGAACGGGTTCATCTCCGCAATCGTACTACAGCTCGAGAAGTCCATCGACAACTAATCTTTGA 2337 44.76 MWLSKYSPERNERVNNSNVNGIVGVAIDKDKGSQGALKWAIDHLLQRGQTVFLIHVKLRSTSLSNSQKIISTEHGVKELFLPFRCFCTRKDIQCKDVVLEDTDIAKGLIEYATNTAIENMVVGASTKTGFLSKFKATDVPSSVIKGAPDFCSVYVISKGKIQSMRSASRPAPAVNPLRSQLAQQSAKSETPDLNVVPHSASVRVPMEKPPLDQPSKPQDEIELMRSPFTRKGYNYRPSYGDLSMQDSDISFVSSGRPSIDRMFPSHYDFQDMGGRATPPRMSNSADFDFNNSFESLPMGRMSLDLNFPYEFSSISQDSDRMSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKFEEERRLEEAKLAEEAALAIAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAERKALQESEEKNKAFNALAQTDNRYRKYTIEEIEEATEFFSESRKIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLCCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRQGNTPPLSWQLRFKIAAEIGTSLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVANNVTEYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQMITSRPPMGLTHYVEKAIENGTFASILDPVVTDWPVEEALSFANLSLKCAELRRKDRPDLGKEILPELNRLRDIAEDLMHPTLMGGISSSRSNSQVSLHLGGTGSSPQSYYSSRSPSTTNL 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30232090 30238997 + Sed0005789.1 Sed05g1633 714259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1633 778 SMART serkin_6 462 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed05g1633 778 MobiDBLite consensus disorder prediction 166 193 - -
Sed05g1633 778 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 434 534 - -
Sed05g1633 778 MobiDBLite consensus disorder prediction 177 193 - -
Sed05g1633 778 CDD STK_N 22 159 - -
Sed05g1633 778 FunFam U-box domain-containing protein 51 535 735 - -
Sed05g1633 778 Gene3D Phosphorylase Kinase; domain 1 440 534 - -
Sed05g1633 778 Gene3D Transferase(Phosphotransferase) domain 1 535 738 - -
Sed05g1633 778 SUPERFAMILY Protein kinase-like (PK-like) 444 717 IPR011009 -
Sed05g1633 778 Pfam Universal stress protein family 23 155 IPR006016 -
Sed05g1633 778 Coils Coil 374 440 - -
Sed05g1633 778 MobiDBLite consensus disorder prediction 742 778 - -
Sed05g1633 778 Coils Coil 321 348 - -
Sed05g1633 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed05g1633 778 PANTHER OS02G0152300 PROTEIN 23 746 IPR051348 -
Sed05g1633 778 ProSiteProfiles Protein kinase domain profile. 462 740 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed05g1633 778 Gene3D HUPs 4 156 IPR014729 -
Sed05g1633 778 Pfam Protein kinase domain 463 715 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed05g1633 778 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1523 Sed-Chr3:9712282 Sed05g1633 Sed-Chr5:30232090 1.80E-290 dispersed
Sed05g0621 Sed-Chr5:4475665 Sed05g1633 Sed-Chr5:30232090 6.30E-105 dispersed
Sed05g0622 Sed-Chr5:4475665 Sed05g1633 Sed-Chr5:30232090 2.30E-94 dispersed
Sed05g1633 Sed-Chr5:30232090 Sed05g2257 Sed-Chr5:35245229 4.30E-236 dispersed
Sed03g2766 Sed-Chr3:44119791 Sed05g1633 Sed-Chr5:30232090 1.50E-218 transposed
Sed13g2108 Sed-Chr13:25785078 Sed05g1633 Sed-Chr5:30232090 0.00E+00 wgd
Sed03g1522 Sed-Chr3:9712282 Sed05g1633 Sed-Chr5:30232090 2.60E-289 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79170 PF00069 Pkinase 5.60E-39 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1633 - - - 0.0