Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed05g1641 | ATGGCACCAGAATATTTCGAAAGTATTCTGGGAGACAAAGGTTGTGATGCTTCTGTGCTTCTTCATTCAAATAACCACACTTCTGAGAAAGATAATGCTGAGAACCTTTCGCTCGCCGGAGACGGGTTCGACACCGTGATCAAAGCTAAGGCCGCAATCGATAACGTGCCAGGATGTAAGAACAAGGTCTCTTGTGCTGACATATTGGCCTTGGCTACTAGAGATGTTGTAGTTTTGACAAGAAAGTGCGTTCGACACCATCTTCCTTTACCCGAATTCGGGTTAGATCAGCTCAATGGCATGTTTGCAAGACATGGTCTAACTCAAACAGATATGATTGCACTCTCAGTTGCACATACAATTGGATTCTCACATTGCAAGCACTTTTCCAAAAGGCTATATAGCTTCCATAGCACACAACGAGTCGATCCGACGTTCAATCGGACATATGTCGACGAGCTGAAGAGGGAATGCCCGAGAAACGTCGACCAGAGGATCGCTGTCGACATGGACTCGACATTGTCATTCTCGTTTGATAATGTGTATTTCAAGAATCTGCAGATGGGGAAAGGGTTGTTCACCTCAGACCAACAGGCTTTTGTTGTTGCAATGACAAAGCTTGGAAGAGTGGGAGTCAAAACAAAAAACCAAGGGGAAATTAGAATTGATTGTTCCTCAGTGAACTAA | 687 | 44.25 | MAPEYFESILGDKGCDASVLLHSNNHTSEKDNAENLSLAGDGFDTVIKAKAAIDNVPGCKNKVSCADILALATRDVVVLTRKCVRHHLPLPEFGLDQLNGMFARHGLTQTDMIALSVAHTIGFSHCKHFSKRLYSFHSTQRVDPTFNRTYVDELKRECPRNVDQRIAVDMDSTLSFSFDNVYFKNLQMGKGLFTSDQQAFVVAMTKLGRVGVKTKNQGEIRIDCSSVN | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 30313778 | 30319737 | + | Sed0003218.1 | Sed05g1641 | 714267 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed05g1641 | 228 | PANTHER | - | 198 | 228 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | SUPERFAMILY | Heme-dependent peroxidases | 13 | 228 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | Gene3D | Peroxidase, domain 2 | 89 | 198 | - | - | |
Sed05g1641 | 228 | Gene3D | - | 208 | 228 | - | - | |
Sed05g1641 | 228 | FunFam | Peroxidase | 89 | 217 | - | - | |
Sed05g1641 | 228 | PRINTS | Haem peroxidase superfamily signature | 171 | 186 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Haem peroxidase superfamily signature | 63 | 80 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Plant peroxidase signature | 1 | 21 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Plant peroxidase signature | 41 | 54 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Plant peroxidase signature | 185 | 202 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Plant peroxidase signature | 62 | 72 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | PRINTS | Plant peroxidase signature | 169 | 184 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | ProSiteProfiles | Plant heme peroxidase family profile. | 13 | 228 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | Pfam | Peroxidase | 13 | 200 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed05g1641 | 228 | Gene3D | - | 13 | 81 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g1641 | Sed-Chr5:30313778 | Sed13g2086 | Sed-Chr13:25598754 | 2.00E-101 | dispersed | |
Sed13g2085 | Sed-Chr13:25598754 | Sed05g1641 | Sed-Chr5:30313778 | 9.90E-102 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed05g1641 | K00430 | - | csv:101218982 | 377.481 |