Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed05g1754 | ATGCAGGCAGATCAGGCGGCGATCAGTCTCAGACCAGGCGGCGGCGGCGGCTTTCGTGGATCCCGATTCGCTACTCCCCGCTTCGATTCTTCCTCCCTTCGTTCTCATGCCGCCCTTGCGTCCATCCTCAAGACTGGAGATCTACGGTTTGAGGGCCATGAGCGAGTCAAGTACACTCGAGACCAGCTTTTGCAGCTTAGAGAGGTTAAAACAGTCCCTGAGATTATCTTGAAGGTCAAAATAGAAGTCGAAACTGAGATTGCTGGGGAGGATCAAACATGGGCTCGTGCTGAAACCATTCAATCACAATCTCAAGGCCGTCACTTTGAGCCTGACAATCGAGATTGGCGTGGTCGATCCGGACAAGTACCTACCTCTGCAGAAGAAGGATCTTGGGAGGATAAGAATTTATTAGGACAATCCGACTCAAATAATAGGACCCAAGTTTCTGGTAACCAAGGGGTTGTTGTTGCACCTGCCCTCATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTTAAAGGAATACTTAACAAATTGACTCCAGAAAAGTTTGACTTGCTCAAGGGTCAACTGATTGACTCTGGGATTGTTTCCGCTGATATTTTGAAGGATGTTATATCACTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTTTGACCTTAATGAGAAGCTTCCTTCATTTCCATCCGAAGTCCCTGGAGAGAAAGACATCACTTTTAGACGAGCTCTCTTAGATATTTGCCAATCGGCATTTGAAGGTGCTGAGCACTTAAGGGCAGAAATTGGGTGGTTGACTAATCCCGAGCATGAAATGGAAAGAGGAGATAAAGAAAAAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTTAAACAGAAGATGGTTACTGAAAGGATTGTTCACCATATTGTTCTGGAGCTTTTGGGGTCGGATGTACAAGCATGCCCTGCCGAGGAGAATGTTGAGGCTATTTGTCAGTTCTTCAACACAATTGGTAAGCAGCTGGATGAGAACAAAAAATCTCGGCAGGTCAATGATGTATACTTCTCCCGGATGAAGGAGCTCACTGCAAACACCCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCTAATAAATGGGTTCCTAGGCGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAGAAGAATCTAGGGCTTCGTCCTGGTTCAATGGCGATGATGAGAAATGGCCGTAATGCCGAGGCCCTTGGTGGGCCTGTTGCTCGACCTGGCTTTGGGGGTATGATGCCTGGAATGCCTCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTTGATTCGGACAATTGGGAGGTTCCTAGATCTCGATCAATGCCAAGGGGCGAAAGCGGGGCTTCTGCTCGTACACCATTAACCGGCAGAACATCTTCCATTAGTTCGAAATATCTACCTCAGGGAAGTGGTGGTGTAATAATAGGGAAAACAAGTGCCTTGTTACAGGGTAGTGCTACCGCTCCTGTCCGAACGCAGCCTGTCTCTCACAACCCTAGACCGGTTGCTCCGGTTGCCTCTGCCATACCCTCTCCTCAGAAGCCAATAGCTCCTGCTGTAGTATCCAATTCAGCTGATCTTCACAAGAAAACTGTTTCCCTGCTCGAGGAATACTTCAGTGTACGGATTCTCGATGAAGCTCTGCAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTGCCATAGCACTTGAAAAGATTCCACCATGTGTAGACCCAGTTGTCAAGCTTCTGGAGCACCTCCTTCGCAAGAATGTCTTAACTGCAAGGGATATCGGTACCGGGTGCCTTCTATATGGGTCGATGATGGATGATATCAGCATTGATCTACCAAAAGCGCCAAACAATTTCGGTGAGATCCTTGGAAAGTTGATATTGATCGGTGGTGTGGATTTCGTAGTCGTAAACGAGATCCTCAAGAAGCTCGAAGATGACTATTACCAAAAGGCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGACAAGGAATTCTGGCCACTCAAAGCGTCGAGATCCAGGCATGTGAGAATTTACTTGCGTAA | 2232 | 46.86 | MQADQAAISLRPGGGGGFRGSRFATPRFDSSSLRSHAALASILKTGDLRFEGHERVKYTRDQLLQLREVKTVPEIILKVKIEVETEIAGEDQTWARAETIQSQSQGRHFEPDNRDWRGRSGQVPTSAEEGSWEDKNLLGQSDSNNRTQVSGNQGVVVAPALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGIVSADILKDVISLIFEKAVFEPTFCPMYALLCFDLNEKLPSFPSEVPGEKDITFRRALLDICQSAFEGAEHLRAEIGWLTNPEHEMERGDKEKMVKLRTLGNIRLIGELLKQKMVTERIVHHIVLELLGSDVQACPAEENVEAICQFFNTIGKQLDENKKSRQVNDVYFSRMKELTANTQLAPRLRFMVRDVLDLRANKWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNAEALGGPVARPGFGGMMPGMPPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGASARTPLTGRTSSISSKYLPQGSGGVIIGKTSALLQGSATAPVRTQPVSHNPRPVAPVASAIPSPQKPIAPAVVSNSADLHKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLAIALEKIPPCVDPVVKLLEHLLRKNVLTARDIGTGCLLYGSMMDDISIDLPKAPNNFGEILGKLILIGGVDFVVVNEILKKLEDDYYQKAIFGGAMKSLNSSPSGQGILATQSVEIQACENLLA | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 31346957 | 31353834 | - | Sed0002231.2 | Sed05g1754 | 714380 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed05g1754 | 743 | MobiDBLite | consensus disorder prediction | 136 | 150 | - | - | |
Sed05g1754 | 743 | MobiDBLite | consensus disorder prediction | 502 | 516 | - | - | |
Sed05g1754 | 743 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 173 | 408 | - | - | |
Sed05g1754 | 743 | MobiDBLite | consensus disorder prediction | 487 | 516 | - | - | |
Sed05g1754 | 743 | SMART | ma3_7 | 578 | 690 | IPR003891 | - | |
Sed05g1754 | 743 | MobiDBLite | consensus disorder prediction | 99 | 150 | - | - | |
Sed05g1754 | 743 | Pfam | MIF4G domain | 182 | 407 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Sed05g1754 | 743 | SUPERFAMILY | ARM repeat | 575 | 729 | IPR016024 | - | |
Sed05g1754 | 743 | SMART | if4_15 | 182 | 407 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Sed05g1754 | 743 | SUPERFAMILY | ARM repeat | 175 | 410 | IPR016024 | - | |
Sed05g1754 | 743 | Pfam | MA3 domain | 579 | 687 | IPR003891 | - | |
Sed05g1754 | 743 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 47 | 740 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER) | |
Sed05g1754 | 743 | Gene3D | - | 173 | 408 | - | - | |
Sed05g1754 | 743 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Sed05g1754 | 743 | ProSiteProfiles | MI domain profile. | 577 | 699 | IPR003891 | - | |
Sed05g1754 | 743 | Gene3D | - | 573 | 731 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g1754 | Sed-Chr5:31346957 | Sed13g1954 | Sed-Chr13:24441564 | 0.00E+00 | dispersed | |
Sed05g1753 | Sed-Chr5:31346957 | Sed05g1754 | Sed-Chr5:31346957 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed05g1754 | K03260 | - | csv:101211356 | 1124.77 |