Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1845 ATGGCTGCCGAAGTGAGTAGTCTGAACCGGGTTCAGGACGAAGATAATCGGACGGCGGTGGGCAGTGGGCAGAAATCAAGGGCTCCGGTTACACGCGATTTGCTAGGCCAATTTTCAAACCTAGCCGCCGAGTCTCAGGAATTAGACCTGGAATTGCGAGTTCCCACCGGCTGGGAGAAACGCCTTGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCACTGAATTCAGAATCCAAATTCCCAAAATCTCCCTCAAAACGAACGTTAAATCTCTTCGATGAAACCAGCCTGGATTTGAAATTGCCGCCGTTCACCAATTACGCCTCCGTTTGTACTCTGGATAAGGTCAAATCTGCTTTGGCAAGGGCCGACAAGGGGCTCATTACAAAAAGGTCGCCGTCGTCATCGGCGGCGCCAACGGCGGTGGGTTGTCCTGGATGCTTATCTTATGTCATGGTAATGAAAAACAATCCTTATTGTCCTCGTTGCCATTCTGTTGTTCCATTGCCCACCATCAAGAAACCTCGGATTGATCTAAACATGTCCATATAA 573 48.52 MAAEVSSLNRVQDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESKFPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKRSPSSSAAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31904864 31905719 + Sed0022394.1 Sed05g1845 714471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1845 190 PANTHER PUTATIVE-RELATED 42 187 - -
Sed05g1845 190 MobiDBLite consensus disorder prediction 1 31 - -
Sed05g1845 190 MobiDBLite consensus disorder prediction 73 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0757 Sed-Chr1:5639941 Sed05g1845 Sed-Chr5:31904864 6.50E-47 wgd
Sed04g3508 Sed-Chr4:44562203 Sed05g1845 Sed-Chr5:31904864 1.20E-70 wgd
Sed05g1845 Sed-Chr5:31904864 Sed05g3301 Sed-Chr5:42371690 2.60E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1845 - - - 0.0