Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g1912 ATGGATCAAGCGGGTAAGCAGGGAGAGGACGAATTTAAAGTTGAGGTGGAACTGTTAAGTCGGCTTCATTCGCCATATTTGTTGGCATTGCTCGGGTATTGCTCGGATAGCAATCATAAATTGCTGGTATATGAGTTCATGGCGAATGGCGGTCTGCAAGAACATCTGTACCCTGTTAGCCGTTTAAATTCCGCCAGCGTTAAGTTGGATTGGGAAACACGGTTGAGAGTTGCGCTTGAAGCTGCCAAAGGTTTAGAGTATTTACACGAACACGTAAGTCCACCAGTAATTCACAGGGATTTCAAGAGCAGCAATGTCCTGCTGGACAAGAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATTGGCTCAGACAAAGCAGGGGGGCACGTCTCGACTCGAGTATTGGGAACACAAGGCTATGTTGCACCCGAGTATGCGCTGACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGAGTTGTCCTCTTGGAGCTGCTTACAGGCCGAGTTCCTGTTGATATGACAAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCTAAGGTTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAAGGCCAGTATTCCATGAAGGATGTTGTTCAAGTCGCAGCGATCGCAGCCATGTGCGTTCAACCCGAGGCGGATTACAGGCCGCTGATGGCTGATGTTGTCCAGTCTCTGGTTCCACTGGCGAGAAATTACAGGACAGCTTCGAAGATCGGTAGCAGTTCTAGCTCCAGCGCTACTAAATCACCTGTGGCACACGACAATGCTAGTTCAGGAGACTGA 849 48.06 MDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSRLNSASVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMTRTPGEASLVSWALLRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLARNYRTASKIGSSSSSSATKSPVAHDNASSGD 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32475863 32483473 - Sed0022674.2 Sed05g1912 714538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g1912 282 FunFam Receptor-like serine/threonine-protein kinase ALE2 47 267 - -
Sed05g1912 282 Pfam Protein tyrosine and serine/threonine kinase 4 247 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed05g1912 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed05g1912 282 MobiDBLite consensus disorder prediction 259 282 - -
Sed05g1912 282 SUPERFAMILY Protein kinase-like (PK-like) 6 247 IPR011009 -
Sed05g1912 282 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Sed05g1912 282 Gene3D Transferase(Phosphotransferase) domain 1 48 270 - -
Sed05g1912 282 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed05g1912 282 PANTHER OS07G0668900 PROTEIN 2 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1912 Sed-Chr5:32475863 Sed07g1920 Sed-Chr7:33349097 5.80E-74 dispersed
Sed05g1911 Sed-Chr5:32475863 Sed05g1912 Sed-Chr5:32475863 5.90E-157 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
79191 PF07714 PK_Tyr_Ser-Thr 6.10E-37 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g1912 - - - 0.0