Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2099 ATGAAACTTACACCAAATTCTTCTGCTACTTTTCTTCTTCTTCTTCTTCTTCCATTTTCCCTTCTCTTTTCTTCACTTATCACTCTCACCTCTGCCATTAAAAGGCCCTATGTTGTCTACATGGGAGCTCACTCCCACGGCGGCCGAAAACCCGTCGACGTCATCGTCGATTCTCACCATGAGTTCCTACGACCGTTTCTTGATGGAAATGATTTTGCAGAAGATGCCATCTTTTATTCATATACAAGGCATATCAATGGCTTTGCTGCAATATTGGAAGATGAAGTAGCCACTCAAATAGCCATGCATCCGAAAGTAGTATCGGTTTTTTTGAACAAAGGAAGAAAGTTACACACAACTAGGTCATGGGAGTTCATGGGCATGGAGAAAAATGGAGCTATCACTTCAAAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATGATGATTTGGGACCAATTCCTCACAGGTGGAAAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAGCTGATCGGAGCAAGATACTTCAACAAAGGCTATGGATCAGCCGCCGGCCGTTTGAATTCGTCCTTCAATTCGCCGAGGGACAAGGAAGGCCATGGTTCCCACACCTTATCCACGGCCGGCGGCAGCTTCGTCGCCGGCGCAAGCGTTTTCGGCCTCGGAAAAGGCACCGCCAAGGGCGGATCGCCTAGGGCACGGGTCGCCGCTTACAAGGTCTGCTGGCCTCCAGTCGCTGGAAACGAGTGCTTCGACGCCGATATCTTGGCCGCGTTTGATGCGGCGATTCACGACGGCGTGGACGTGTTGTCGATCTCCCTAGGCGGAGATCCGAATCCTCTGTTTAACGATAGTGTTGCGATTGGCTCTTTCCACGCCGTGAAGCATGGGATTGTGGTGGTTTGCTCGGCCGGAAATGCTGGACCTACCGCTGGTTCTGTGACTAATACTGCGCCCTGGGAGATCACCGTTGGAGCCAGCACCATGGACAGGAAGTTCCCTAGCCTTGTTGTTCTTGGGAACAAGAGGCAGATTGAGGGCGAAAGCTTGTCCCCTGATGCTTTGCCAAGCAGGAAGTTCTACCCACTCATGAATGCTGCAGATGTTAGATTGGCCAATGTATCAGTTCATGAAGCTCAATTGTGTAAAGCTGGTACACTTGATCCTATGAAGGCAAAGGGAAAGATCCTTGTCTGTCTTCGTGGCGATAACGCAAGAGTTGACAAGGGTGAGCAAGCATTGTTGGCTGGTGCTGTTGGCATGATTCTTGCCAATGGTGAGGTCAATGGGAATGAAATTGTTGCTGACCCACATATCCTTCCAGCTTCACACATCAATTTCACTGATGGCATTGCGGTGCTCAAATACACCAATTCAACCAAATTGCCTTTGGCTTATATCACACGAGCTACAACTCAGTTAGGAGTAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGTCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATGTTACAGCTCCCGGGCTGAGTGTTATTGCGGCTTATACTGGAGCAGAAGGACCAACGAATCAAGAATTTGATCATCGTCGAGTTCTTTTTAACTCAGTATCAGGAACTTCCATGTCATGCCCTCATGTTTCTGGTATTGTTGGTCTTCTCAAAACTCTTTACCCTCATTGGAGTCCTGCGGCTATTAAATCTGCAATCATGACCACTGCAAGCACGCTAGACAATAACTTCGAGCCGCTCCTCAATGCTTCCAACTCCGAGGCCACGCCATTCAACTACGGAGCAGGACATGTTCATCCAAATGGTGCTACAGATCCTGGCTTGGTCTATGACATAGAGATTAAAGAATATCTGTTATTTCTATGTGCATTAGGATATGATGAAACTCAACTATCAAAATTCTCCAAAGGTCCCTTCAATTGCTCAGAGCCTATTAGTCCAACAAATCTAAACTATCCTTCAATTACTGTACCTAAGCTCTCTAAATCAATCACAATAACTCGAAGACTAAAGAACGTCGGTTCTCCTGGAATCTACAAAGTCAAGATTAGAAAACCGTCTGGGATATCGGTTTCGGTTAAGCCAAAGAAGTTGAGTTTCACAAGGGTAGGTGAAGAAATGAGCTTCAAAGTGTCCATGAAAGTCAAGAAACAGAAAGCAGCCAGGAACTATGCATTTGGTGATCTAATATGGTCAGATGGTAAGCACCGTGTAAGAAGCCCTATTGTGGTAAAGGCAGTCTAG 2322 46.34 MKLTPNSSATFLLLLLLPFSLLFSSLITLTSAIKRPYVVYMGAHSHGGRKPVDVIVDSHHEFLRPFLDGNDFAEDAIFYSYTRHINGFAAILEDEVATQIAMHPKVVSVFLNKGRKLHTTRSWEFMGMEKNGAITSKSIWKKARFGEDTIIGNLDTGVWPESKSFSDDDLGPIPHRWKGICQNQNDPSFHCNRKLIGARYFNKGYGSAAGRLNSSFNSPRDKEGHGSHTLSTAGGSFVAGASVFGLGKGTAKGGSPRARVAAYKVCWPPVAGNECFDADILAAFDAAIHDGVDVLSISLGGDPNPLFNDSVAIGSFHAVKHGIVVVCSAGNAGPTAGSVTNTAPWEITVGASTMDRKFPSLVVLGNKRQIEGESLSPDALPSRKFYPLMNAADVRLANVSVHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAVGMILANGEVNGNEIVADPHILPASHINFTDGIAVLKYTNSTKLPLAYITRATTQLGVRPAPFMAAFSSVGPNTITPEILKPDVTAPGLSVIAAYTGAEGPTNQEFDHRRVLFNSVSGTSMSCPHVSGIVGLLKTLYPHWSPAAIKSAIMTTASTLDNNFEPLLNASNSEATPFNYGAGHVHPNGATDPGLVYDIEIKEYLLFLCALGYDETQLSKFSKGPFNCSEPISPTNLNYPSITVPKLSKSITITRRLKNVGSPGIYKVKIRKPSGISVSVKPKKLSFTRVGEEMSFKVSMKVKKQKAARNYAFGDLIWSDGKHRVRSPIVVKAV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34142209 34154838 - Sed0021275.1 Sed05g2099 714725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2099 773 Gene3D - 355 499 - -
Sed05g2099 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 118 IPR037045 -
Sed05g2099 773 FunFam Subtilisin-like protease SBT5.3 26 118 - -
Sed05g2099 773 SUPERFAMILY Subtilisin-like 117 634 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed05g2099 773 FunFam Subtilisin-like protease SBT1.5 148 369 - -
Sed05g2099 773 Pfam Peptidase inhibitor I9 37 118 IPR010259 -
Sed05g2099 773 CDD Peptidases_S8_3 116 597 IPR034197 -
Sed05g2099 773 FunFam subtilisin-like protease SBT1.5 355 499 - -
Sed05g2099 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Sed05g2099 773 Gene3D - 647 773 - -
Sed05g2099 773 Pfam Fibronectin type-III domain 675 770 IPR041469 -
Sed05g2099 773 Pfam Subtilase family 146 622 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed05g2099 773 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Sed05g2099 773 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Sed05g2099 773 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Sed05g2099 773 Pfam PA domain 403 476 IPR003137 -
Sed05g2099 773 SUPERFAMILY PA domain 412 475 IPR046450 -
Sed05g2099 773 CDD PA_subtilisin_like 362 492 - -
Sed05g2099 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 769 IPR045051 -
Sed05g2099 773 Gene3D Peptidase S8/S53 domain 148 643 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed05g2099 773 FunFam p69E protein-like 647 773 - -
Sed05g2099 773 ProSiteProfiles Serine proteases, subtilase domain profile. 122 630 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2099 Sed-Chr5:34142209 Sed08g2878 Sed-Chr8:39924691 1.40E-263 dispersed
Sed05g2099 Sed-Chr5:34142209 Sed03g1334 Sed-Chr3:8497376 1.10E-247 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2099 - - - 0.0