Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed05g2291 | ATGGAGTCTCTAGATCCATCCCTTTTGTTCTTCTTTCCTTTTTCCCTTCTTCTCCTAGTCGTTTTTATATGGAGTTTACGTAGTAAACTTTCCTATCCGCCCGGCCCGAGTGGGCTACCCATCATCGGCAACATGCTCATGATGGATCAGCTCACCCATCGTGGCTTGGCTCGTCTTGCCACCGTCTATGGTGGCCTTTTCCACCTCCGCCTTGGCGCCCTACACATGGTGGTTGTCTCCACACCCGACATGGCACGCGAGTTCCTCCAAGTTCAAGACATTGCATTTGCAAACAGACCTGCAAATGTGGCAATCTCATACCTCACATACAATCGTGCCGATATGGCCTTTGCCAATTATGGTCCATTCTGGCGCCAAATGCGAAAGATTTGCGTCATGAAGCTCTTTAGTCGCCGACGTGCAGAGTCATGGGCGTCTGTGCGTGACGAAGTTGACGCTCTAGTCCAAATTGTTTCGGAGAAAATTGGTGAGCCCGTGGATATCGGTGAGCTGGTTTTTGGTCTCACACGAAACATAACATACAAAGCTGCATTTGGATCGAGCTCGCACGAAGGACAAGACGAGTTTGTTACAATCTTGCAAGAATTCTCTAAATTGCTTGGAGCTTTTAACATTGCAGATTTTTTGCCATGGTTAGGTTGGATTCATGCCCGAGGATTCAACGAAAGAATGGCGAAAGCTCGAAGAGCTCTTGATGTGTTCATTGATAGCATAATCGACGAACATATACAAAAGAAGATGAAAAAGAAAGGAAAAAAAGAAGATGAAGAAGTAGATTCAGATATGGTTGATGAATTAATGGCATTCTTTATTGATGAGTCGAATAGCAATGAGTTTGATGATTCACAATCAACTCTTCAACTCACTAGAGATAATATCAAAGCCTTAATCATGGATGTGATGTTCGGTGGAACAGAAACAGTAGCGTCAGTCATAGAATGGGCAATGGCGGAATTAATAAAAAATCCGGAAGAGCTAAAAAAGGTTCATCAAGAACTAATACAGACCGTTGGATTAGATCGACGGCTCACAGAATCCGACCTCGAAAATCTCCCCTACTTAAAATCCGCAGTCAAAGAAACCCTCCGCCTCCACCCGCCGATCCCGCTGCTCCTCCACGAGACCGCCGCCGACGCCGCCGTCGCCGGCTACTCCATTCCGACCGGTTCACGAGTCTGGATCAACGCCTGGGCGATCGGCCGGGACCCAACCGCCTGGGCCGACCCCGACCGGTTCCGTCCGGGGAGGTTTCGAGACGCCGGAGCTCCGGATTTCAGAGGGAGCGATTTCGAGTTCATCCCGTTTGGGTCGGGTCGGAGGTCTTGCCCCGGGATGCAACTCGGGTTGTATGCTTGCGAAATGGCGGTGGCGAATCTCGTTCATTGCTTCGAGTGGAACTTGCCGGCCGGAGTGAAGGCCGGTGACCTCGATATGAACGACTCGTTCGGACTCACCGCGCCGAGAGCGGTTCGACTCGTTGCCGTACCGAGTTATCGACTGAACTCGCCCGAGTTTGAACTCGGTGGTGAGAGACGGGAAGATTATTGA | 1569 | 49.9 | MESLDPSLLFFFPFSLLLLVVFIWSLRSKLSYPPGPSGLPIIGNMLMMDQLTHRGLARLATVYGGLFHLRLGALHMVVVSTPDMAREFLQVQDIAFANRPANVAISYLTYNRADMAFANYGPFWRQMRKICVMKLFSRRRAESWASVRDEVDALVQIVSEKIGEPVDIGELVFGLTRNITYKAAFGSSSHEGQDEFVTILQEFSKLLGAFNIADFLPWLGWIHARGFNERMAKARRALDVFIDSIIDEHIQKKMKKKGKKEDEEVDSDMVDELMAFFIDESNSNEFDDSQSTLQLTRDNIKALIMDVMFGGTETVASVIEWAMAELIKNPEELKKVHQELIQTVGLDRRLTESDLENLPYLKSAVKETLRLHPPIPLLLHETAADAAVAGYSIPTGSRVWINAWAIGRDPTAWADPDRFRPGRFRDAGAPDFRGSDFEFIPFGSGRRSCPGMQLGLYACEMAVANLVHCFEWNLPAGVKAGDLDMNDSFGLTAPRAVRLVAVPSYRLNSPEFELGGERREDY | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35460101 | 35463858 | - | Sed0021687.1 | Sed05g2291 | 714917 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PANTHER | CYTOCHROME P450 84A1-RELATED | 7 | 510 | IPR053062 | GO:0004497(PANTHER) | |
| Sed05g2291 | 522 | Pfam | Cytochrome P450 | 33 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed05g2291 | 522 | Gene3D | Cytochrome P450 | 26 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | SUPERFAMILY | Cytochrome P450 | 33 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed05g2291 | 522 | FunFam | Cytochrome P450 84A1 | 25 | 505 | - | - | |
| Sed05g2291 | 522 | CDD | CYP71-like | 63 | 499 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed05g2291 | Sed-Chr5:35460101 | Sed10g0976 | Sed-Chr10:8112930 | 6.50E-188 | dispersed | |
| Sed05g2291 | Sed-Chr5:35460101 | Sed14g1083 | Sed-Chr14:20318210 | 1.80E-100 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed05g2291 | K09755 | - | csv:101217850 | 829.706 |