Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2332 ATGATGGCTGGAACTAATCAAATCAATCTCAACGACTCTAAGATGGTGGTTCCACTTAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGGCCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGAAAAGTCCCCGCCAATGCTAACCCTGTGGATGGTACTTTCTCTTTTGATGTCATTATCGATCGGCCTACGAGCCTCCTCTGTAGAATATACCGACCGGCCATTGCTGGCGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCGCATTCGTCTGCTAACAGTGCTATCTACGATACGCTGTGTCGCCGATTGGTCAGCCTCTGCAAGGCTGTTGTTGTCTCTGTGAACTATAGGCGTGCGCCTGAGAATCGGTATCCTTGTGCTTATGATGATGGATGGACTGCGCTCAATTGGGTGAACTCAAGATCCTGGCTTCAAAGTAAAGACTCGAAAACATATATTTATTTGGCTGGCGATAGTTCGGGAGGAAACATTGTACACCATGTTGCATCAAGAGCAGTAAAATCGGGGATTGAAGTATTGGGTAATATACTTCTCAATCCTATGTTTGGAGGGCAGGAAAGAACTAATTCTGAGGTTCGGTTGGATGGCAAGTATTTCGTCACCATTCGGGATAGAGATTGGTATTGGAGGGCCTTTCTCCCTGAAGGGGAAGATAGAGACCATCCAGCATGTAATCCCTTCGGTCCAAGGGGTAATAGCCTCGAAGAAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCAGGTTTAGATCTTGTCCAGGACTGGCAATTGGCTTATGCTAAAGGGCTTGAGAAGGATGGCCATAAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTCCCGAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGACTTTGTGAGCCCTGACTGTTAA 1041 46.21 MMAGTNQINLNDSKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVIIDRPTSLLCRIYRPAIAGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVLGNILLNPMFGGQERTNSEVRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEEIKFPKSLVVVAGLDLVQDWQLAYAKGLEKDGHKVKLLYLEQATIGFYLLPNTEHFYTVMDEISDFVSPDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35787362 35790010 + Sed0018814.1 Sed05g2332 714958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2332 346 PANTHER ARYLACETAMIDE DEACETYLASE 37 335 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Sed05g2332 346 SUPERFAMILY alpha/beta-Hydrolases 59 342 IPR029058 -
Sed05g2332 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Sed05g2332 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Sed05g2332 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787(InterPro)
Sed05g2332 346 FunFam Gibberellin receptor GID1 2 344 - -
Sed05g2332 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2332 Sed-Chr5:35787362 Sed07g0379 Sed-Chr7:2849822 1.40E-149 dispersed
Sed07g0491 Sed-Chr7:3753320 Sed05g2332 Sed-Chr5:35787362 2.20E-59 transposed
Sed08g1815 Sed-Chr8:32915325 Sed05g2332 Sed-Chr5:35787362 2.40E-58 transposed
Sed04g3545 Sed-Chr4:44853792 Sed05g2332 Sed-Chr5:35787362 2.50E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2332 K14493 - csv:101213253 636.336