Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed05g2596 | ATGGATCCAAAATCTACCGATTCACCAACACCACCTACTGTTAGCTCATTCGAAACTAAACATCCAGAAGTGAAGCCTCAGGCTCCTGCTACTTCTGGAATGGATAATGTGGCACGTGATGCACCATCTAAGCTATCTCCTACTGGCATAACTTCATGGTCTAAAAGCTTGAAAATTTCCCAACCACAGTCGACTTCACAAGATGACACTACTGAAAATGCTGGGAAGTCAGCTTTTGTGCGTTTTACTACCGGCTTGGGCTTGAATTTATCTCCCAAATCCGCTGCATCTAATGATTCCCCTGTTGGAACTACAAAAACTGCCCAACCTAGTTTTGTGGGATCAATTACTAGAGGCTTGGTTAACTCTTCAAAGAATGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGCTGTCTCACAAAATAAGCGAAGATACCAGGAAGGCGGCTTTGATCTGGATATGACTTATATTACTGAAAATATCATTGCTATGGGTTTCCCTGCAGGTGACATGAGCTCAGGGTTTTTTGGATACGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCTGAGAGGCTATATGATGCATCCTTATTTGAAGGAAAGGTGGCTTGCTTTCCTTTTGATGACCATAACTGTCCCCCAGTTCAACTTATAATATCATTTTGCCATAGTGCGTATTCATGGCTCAAGGATGATATTGAAAATGTTGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGCCTTGTTTTACCAAGTCAGATTAGATATGTCAAATATTTTGAGCGTAGTTTAACATACTTCAATGGAGAAAATCCTCCTGGCCGTAGGTGTGTGCTTAGAGGCTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCTACTAAAACACATCAAAGAACCAAGAGTCTTTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTCACCTTGCCCGGGGAGCCTGGTCTGGCTGAGTTGTGTGGAGACTTCAAGGTTCAATTCCATGACCGCCAAGGAGATTTCTATTGTTGGTTAAACACAACCATGATTGAAAATCGGAAAATGCTGTACACTAATGATCTTGATGGGTTCGACAAGAGGAAACTGGCTTCCCCTGGATTTCAGGTGGAGGTTGTGCTAGTAGATACGTCACCCAATGTGGACAATACTAACAAGAAGTCGGATGAGAGCTCGGGTTTGAAACCTTCACGAGTTGATGGAAGTGAAGTTTACGAGAACCAAAACATAAAATCAGGAACTAACGATAGAGATGATGTATTTTCTGACGGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGGAGGCAGCTGCAGGTTCAGGGGCTGAAGGATCAGCTGTCAAGACGACATCTAAATCTCAAACTAGTGCAACTTCATCAGACGATATCACGAGTTTGTCACACGCAACAAAGCAAGTATCCCTAGGAGATGGTGGAGCTAAACAGACTGCTCCAGCCAGCAACCGAAAAAGCGATGGAGTCGGCAGATCTGATTCCCTCTCAGAAGTTCCAAGTTCAGAAAGTGAATTCAAGGCAATGGCAGCTGATGCTTCTGTTTTCACATTTGGTGACGATGAAGACTATGAAAGCGAGTAA | 1836 | 42.81 | MDPKSTDSPTPPTVSSFETKHPEVKPQAPATSGMDNVARDAPSKLSPTGITSWSKSLKISQPQSTSQDDTTENAGKSAFVRFTTGLGLNLSPKSAASNDSPVGTTKTAQPSFVGSITRGLVNSSKNAVKAVQVKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCHSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERSLTYFNGENPPGRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKSLSPEDFWFTAPKKGIMVFTLPGEPGLAELCGDFKVQFHDRQGDFYCWLNTTMIENRKMLYTNDLDGFDKRKLASPGFQVEVVLVDTSPNVDNTNKKSDESSGLKPSRVDGSEVYENQNIKSGTNDRDDVFSDGESEGGSSKSKEAAAGSGAEGSAVKTTSKSQTSATSSDDITSLSHATKQVSLGDGGAKQTAPASNRKSDGVGRSDSLSEVPSSESEFKAMAADASVFTFGDDEDYESE | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 37669456 | 37675785 | + | Sed0022035.2 | Sed05g2596 | 715222 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed05g2596 | 611 | Pfam | Polymorphic toxin system, DSP-PTPase phosphatase | 225 | 278 | - | - | |
Sed05g2596 | 611 | CDD | PTP_PTEN | 154 | 318 | IPR045101 | GO:0016791(InterPro) | |
Sed05g2596 | 611 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 157 | 324 | IPR029021 | - | |
Sed05g2596 | 611 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 144 | 323 | IPR029023 | - | |
Sed05g2596 | 611 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 260 | 270 | IPR016130 | GO:0016311(InterPro) | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 564 | 586 | - | - | |
Sed05g2596 | 611 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 129 | 326 | - | - | |
Sed05g2596 | 611 | ProSiteProfiles | C2 tensin-type domain profile. | 330 | 457 | IPR014020 | - | |
Sed05g2596 | 611 | SMART | PTEN_C2_2 | 328 | 456 | IPR014020 | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Sed05g2596 | 611 | Pfam | PTEN2, C2 domain | 330 | 457 | - | - | |
Sed05g2596 | 611 | Gene3D | - | 333 | 458 | - | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 459 | 611 | - | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 524 | 552 | - | - | |
Sed05g2596 | 611 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 346 | 454 | IPR035892 | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 45 | 74 | - | - | |
Sed05g2596 | 611 | Gene3D | Protein tyrosine phosphatase superfamily | 129 | 326 | IPR029021 | - | |
Sed05g2596 | 611 | MobiDBLite | consensus disorder prediction | 492 | 510 | - | - | |
Sed05g2596 | 611 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 131 | 564 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Sed05g2596 | 611 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 258 | 297 | IPR000387 | GO:0016311(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g3520 | Sed-Chr4:44650878 | Sed05g2596 | Sed-Chr5:37669456 | 4.70E-40 | dispersed | |
Sed05g2596 | Sed-Chr5:37669456 | Sed05g2598 | Sed-Chr5:37669456 | 0.00E+00 | dispersed | |
Sed05g2595 | Sed-Chr5:37669456 | Sed05g2596 | Sed-Chr5:37669456 | 0.00E+00 | tandem | |
Sed05g2596 | Sed-Chr5:37669456 | Sed05g2597 | Sed-Chr5:37669456 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed05g2596 | K01110 | - | csv:101222304 | 1061.6 |