Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2636 ATGAGAGGACAGCATTCTCACCCACCGAAGCCGGCTTTCGCCGGACCCGACGACGAAAACGAACCGGCTCGCTCTTACATCGCCGGAGTGAACGCTCCGTTAGGCGTCGGGATTCGGAAGAAGGGGACCGGAGTCCGCCCATGGCTGCTCCTTGACTCGACCGGCGGTGCTCAGGTGGTGGAGGCCGGAAAACACGCGATCATGCGGCGGACCGGCCTGCCGGCTCGGGACCTTCGGATCCTCGATCCGTTGCTCTCGTATCCGTCTACGATTCTTGGGCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCCATTATCACCGCTCAAGACGTGTTGGTGTTGAATGCTAGGGATCCGTCCGTAACCCCCTTTGTTGACGAGCTTCAGAGGCGGGTGTTGCGGCATCATCAAGCCACTAAGGCCACTCAGGAGGGCAATGCCGATGATTCTAGTTGGAGAAGCTTGTTTGATTTGGAAGAGCCACGGTCGAGGGCTCAAAGTCCTAATAATTCCTACCAAGGGTTTCCGCAGGCTGAAGAAGAGGAAGGGAAGGAGAACGGAAAGCAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCATTTGAGTTTGTTGCTTTGGAGGCATGTCTTGAAGCTGCCTGCAGTTGCTTAGAAAGTGAAGCAGATACATTGGAGCTTGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGCACTCTCAACTTGGAACGGGTGCGTCAGATCAAAAGTCGATTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATAGTTCAACAACAGCTTGATACCTCTTCCAGTTCTTCAATTCCTGAAAGAGATGAAATGGAAGTTGAAGTTGAGCAATTAGGAAAAGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAATTTCTGGCAATTATGAAGGCAATTTGGATGCTTCCCAAGACCATTTGTTTGGTGCATCAAATGTGGGCAGGGACAGCCACGGGACCCGGACAAGTACTATCCATAGTGCTATAAGCAAACAACTGGATGTGGAGGAACTTGAGATGCTGTTGGAGGCATACTTTGTGCAAATTGATGGTACGCTGAACAAGCTTTCAACGTTAAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAACCATCTTCTACAAATGGGAGTAATGTTAACAACAGCAACCCTTGTTGTGAGCGCCTTCGTCGTGGTCGCAGGTGTTTTCGGGATGAACATCCATATTGAACTGTTCGAACCCGAAAAAGCAGGCATGACGCAGTTCATGTGGACCGTTGGTGGTGGTACTATGGGATCCATCTTCCTGTATGTCGTTGCCATTGCCTGGTGCAAGCACAAACGCTTGCTCGAGTAG 1488 49.26 MRGQHSHPPKPAFAGPDDENEPARSYIAGVNAPLGVGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVLVLNARDPSVTPFVDELQRRVLRHHQATKATQEGNADDSSWRSLFDLEEPRSRAQSPNNSYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKIVQQQLDTSSSSSIPERDEMEVEVEQLGKDDSIPAEISLEGGGISGNYEGNLDASQDHLFGASNVGRDSHGTRTSTIHSAISKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFEPEKAGMTQFMWTVGGGTMGSIFLYVVAIAWCKHKRLLE 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37936720 37941502 - Sed0019533.1 Sed05g2636 715262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2636 495 MobiDBLite consensus disorder prediction 163 191 - -
Sed05g2636 495 Coils Coil 211 231 - -
Sed05g2636 495 Pfam Magnesium transporter MRS2-like 53 136 - -
Sed05g2636 495 Pfam Magnesium transporter MRS2-like 201 294 - -
Sed05g2636 495 Pfam Magnesium transporter MRS2-like 373 418 - -
Sed05g2636 495 MobiDBLite consensus disorder prediction 1 22 - -
Sed05g2636 495 CDD Mrs2_Mfm1p-like 48 493 IPR039204 -
Sed05g2636 495 FunFam Magnesium transporter MRS2-1 36 119 - -
Sed05g2636 495 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 493 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Sed05g2636 495 Gene3D - 38 119 - -
Sed05g2636 495 Gene3D Magnesium transport protein CorA, transmembrane region 183 423 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2636 Sed-Chr5:37936720 Sed06g2048 Sed-Chr6:44545785 1.20E-90 dispersed
Sed10g1946 Sed-Chr10:36189412 Sed05g2636 Sed-Chr5:37936720 3.10E-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2636 - - - 0.0