Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2678 ATGGCGGCTACGGCCGACCGCCTCCGCCCTCTCGTGAAGTTTTCCGGCCAGGGGACTCGGTCAGATGAGGATCCGGCGGGCACTCCGCCTCTACTTTCGAGGATGTTGAGTTATCCCGTCGGGATTATTCATCACCAGTTGCACCGCCGTCCCGCTGCCGGGAGGCCACCGGCGCCGCGGCGGCAGCAGTCCTTTAGTCGAGAGTTTGGCCATGCTGCTGCGGAAACCGTTCTTCTTACTCGTCTGAGCTTCACCCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAAATTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCTGGGTTTCTTCAAGTTATGTATGATTATTTCTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAGCCAAGAAATAGGTTGGATTTGTATTTGCCTACAAATATCGATGAAAAAAAACCGGTTGTGATATTTGTAAGCGGCGGAGCTTGGATTATTGGGAATAAAGCATGGGGAGCTCTTTTAGGCATGCAGTTAGCAGAGAGAGACGTCATTGTGGCCTCAATTGATTATAGAAATTTTCCGCAGGGTACAATTACTGACATGGTGAAAGATGTTTCTCAAGGGATTTCATTTGTCTGCAAGAATATAGCAGACTATGGAGGAGATCCAGACAGAATCTTTCTAATGGGACAATCTGCTGGTGCACATATTTCCGTTTGTGCTTTGTTGGAGCATGCAATCAAAGAAGCTGAAAAAGGAGAGACCGTAGATTGGAGTGTCTCCCAAATAAAATCTTATTTTGGTTTGTCTGGAGGTTATAACTTATTAAATCTAATTGATCACTTCGATAGCCGGGGTCTATATCGCTCTGTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCTGAAATAAGAATTCAAGATCCCAGCATCAGAGATGTTGTATCCAGCTTACCTCCTTTTGTTCTTTTCCATGGCACCGGTGATTATTCAATTCCATCAGATGCCAGTAAAACTTTTGTTGAGACACTTCTAAAAGCAGGGGCACAAGCTGACCTATTTCTTTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAGGATCCGTTTCGGGGAGGAAGTTATGAACTTTTTGATCAAATAGTTGCCATATTACATGCTGGCGACGAGGAAGCTCTTGCGAAGGATTCTATGGCGCCGCCCAAACCGCGCCTCGTTCCAGAGATTTTGATAAGACTGGCACGAATGGTTAGCCCTTTCTGA 1281 45.67 MAATADRLRPLVKFSGQGTRSDEDPAGTPPLLSRMLSYPVGIIHHQLHRRPAAGRPPAPRRQQSFSREFGHAAAETVLLTRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQVMYDYFFSSQVRRDIIYGNQPRNRLDLYLPTNIDEKKPVVIFVSGGAWIIGNKAWGALLGMQLAERDVIVASIDYRNFPQGTITDMVKDVSQGISFVCKNIADYGGDPDRIFLMGQSAGAHISVCALLEHAIKEAEKGETVDWSVSQIKSYFGLSGGYNLLNLIDHFDSRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSIRDVVSSLPPFVLFHGTGDYSIPSDASKTFVETLLKAGAQADLFLYEGKTHTDLFLQDPFRGGSYELFDQIVAILHAGDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 38194872 38203570 - Sed0000837.1 Sed05g2678 715304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2678 426 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 391 IPR050300 GO:0016298(PANTHER)
Sed05g2678 426 Pfam BD-FAE 141 350 IPR049492 -
Sed05g2678 426 Gene3D alpha/beta hydrolase 122 374 IPR029058 -
Sed05g2678 426 MobiDBLite consensus disorder prediction 1 30 - -
Sed05g2678 426 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
Sed05g2678 426 SUPERFAMILY alpha/beta-Hydrolases 106 388 IPR029058 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2678 Sed-Chr5:38194872 Sed06g1850 Sed-Chr6:42899732 1.70E-138 dispersed
Sed05g2678 Sed-Chr5:38194872 Sed05g2679 Sed-Chr5:38194872 1.30E-215 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2678 K15889 - csv:101206540 627.861