Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2679 ATGGCGGCTACGGCCGACCGCCTCCGCCCTCTCGTGAAGTTTTCCGGCCAGGGGACTCGGTCAGATGAGGATCCGGCGGGCACTCCGCCTCTACTTTCGAGGATGTTGAGTTATCCCGTCGGGATTATTCATCACCAGTTGCACCGCCGTCCCGCTGCCGGGAGGCCACCGGCGCCGCGGCGGCAGCAGTCCTTTAGTCGAGAGTTTGGCCATGCTGCTGCGGAAACCGTTCTTCTTACTCGTCTGAGCTTCACCCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAAATTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCTGGGTTTCTTCAAGTTATGTATGATTATTTCTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAGCCAAGAAATAGGTTGGATTTGTATTTGCCTACAAATATCGATGAAAAAAAACCGGTTGTGATATTTGTAAGCGGCGGAGCTTGGATTATTGGGAATAAAGCATGGGGAGCTCTTTTAGGCATGCAGTTAGCAGAGAGAGACGTCATTGTGGCCTCAATTGATTATAGAAATTTTCCGCAGGGTACAATTACTGACATGGTGAAAGATGTTTCTCAAGGGATTTCATTTGTCTGCAAGAATATAGCAGACTATGGAGGAGATCCAGACAGAATCTTTCTAATGGGACAATCTGCTGGTGCACATATTTCCGTTTGTGCTTTGTTGGAGCATGCAATCAAAGAAGCTGAAAAAGGAGAGACCGTAGATTGGAGTGTCTCCCAAATAAAATCTTATTTTGGTTTGTCTGGAGGTTATAACTTATTAAATCTAATTGATCACTTCGATAGCCGGGGTCTATATCGCTCTGTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCTGAAATAAGAATTCAAGATCCCAGCATCAGAGATGTTGTATCCAGCTTACCTCCTTTTGTTCTTTTCCATGGCACCGGTGATTATTCAATTCCATCAGATGCCAGTAAAACTTTTGTTGAGACACTTCTAAAAGCAGGGGCACAAGCTGACCTATTTCTTTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAGGTAAGCCTACTCAAGACTCTGTAG 1143 45.23 MAATADRLRPLVKFSGQGTRSDEDPAGTPPLLSRMLSYPVGIIHHQLHRRPAAGRPPAPRRQQSFSREFGHAAAETVLLTRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQVMYDYFFSSQVRRDIIYGNQPRNRLDLYLPTNIDEKKPVVIFVSGGAWIIGNKAWGALLGMQLAERDVIVASIDYRNFPQGTITDMVKDVSQGISFVCKNIADYGGDPDRIFLMGQSAGAHISVCALLEHAIKEAEKGETVDWSVSQIKSYFGLSGGYNLLNLIDHFDSRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSIRDVVSSLPPFVLFHGTGDYSIPSDASKTFVETLLKAGAQADLFLYEGKTHTDLFLQVSLLKTL 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38194872 38203570 - Sed0000837.2 Sed05g2679 715305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2679 380 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
Sed05g2679 380 Gene3D alpha/beta hydrolase 122 377 IPR029058 -
Sed05g2679 380 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 373 IPR050300 GO:0016298(PANTHER)
Sed05g2679 380 MobiDBLite consensus disorder prediction 1 30 - -
Sed05g2679 380 Pfam BD-FAE 141 350 IPR049492 -
Sed05g2679 380 SUPERFAMILY alpha/beta-Hydrolases 106 374 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2679 Sed-Chr5:38194872 Sed06g1850 Sed-Chr6:42899732 4.00E-118 dispersed
Sed05g2678 Sed-Chr5:38194872 Sed05g2679 Sed-Chr5:38194872 1.30E-215 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2679 K15889 - csv:101206540 525.398