Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2776 ATGGCATTGTTAGCTAAAGAAAGTGTAGAAAGCGGACAACGGATTTCTAGTATTATTGGGACTGAAAAATGTGAAAGCTACTTAATTTTTAGTGGTGAAACATCGCTGGGGGGTGCATTCCGGGTATTCCTATATTTTATGGGCATTGCTTATTGTTTCATTGGATTGTCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTGGTGAAGCACTCAAGGAAGGTGGTGGAGAAAGATCTATGCACCAATACTGAAGTTATTCGATATGAGAAGGTCTGGAATTTTACGATTGCAGATATCAGCTTACTGGCATTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTCTGGGACCTGGAACACTGGTTGGCTCTGCTGCTTTCGACCTTTTTCCCATTCATGCAGTTTGCGTTGTAGTTCCCAAGGCAGGAGAGTTGAAAAAAATATCTGACATTGGAGTTTGGCTAGTTGAACTCGTTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTCTGGAGGTGTGGACTCCAAATGTAATAACGCTATGGGAAGCTTTGTTGACTGTACTACAATATGGATTACTGCTGACACATGCTTATGCTCAAGACAAGCGATGGCCCTACTTGTCCCTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCTCCTGAGCCTGCTACATGCAAACAGGGTGATGTTCATGACGAGGTATTTGAAGCCCAAGAGAATGGGGAGAGAAGCATCGTTGACATTTTCTCTGTCCATGATAGAAATGAAAACGTGTATCATGAAGTTCATGGAAATGATGATGCCGAATGCTCTTGTTGTAATTTTCCAAAGATGGATAAAAATGTGGACCACCCCCATCATTTGCTTGCAGTTTGGAAACAACAATTTGTTGATGCACTTTCGTTGGAAACTTCGGAATCAAGAAAGCTGAACAACATCTGTGTACGATTTGCAAGATTATGCTGGCAGTTGTTACTTGCTCCTTGGAGACTTTTGTTTGCATTTGTGCCTCCTTATCACATAGCTCATGGATGGCTTGCCTTCATTTGCTCTCTTATTTTCATAAGTGGGATTGCTTATGTCGTCACTAAGCTCACAGATCTTATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACGGCATTGGCAGCAGGAACTTCTTGGCCAGATTTGGTGGCTAGTAAAATTGCTGCTGAACGTCAGATAACTGCAGATTCTGCCATTGCAAACATTACTTGCAGCAATTCGGTGAACATATACGTGGGCATCGGAGTTCCATGGCTGATAAACACAGCCTACAATTACATAGCGTATCGAGAGCCCCTGAGGATAGAGGATGCAGCAGGTCTGAGCTTCTCATTGCTTGTTTTTTTCTCAACTTCTGTGTGTTGCATTGCTGTTCTTGTGTTCAGGCGTTTAACATTGGGAGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGACTACCTGCATTTTTTTCATGCTCCTTTGGCTCATCTTTGTTGTGCTCTCTTCCCTCAAGGTTTCTGATATCATCTGA 1614 42.75 MALLAKESVESGQRISSIIGTEKCESYLIFSGETSLGGAFRVFLYFMGIAYCFIGLSAITARFFRSMENVVKHSRKVVEKDLCTNTEVIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELVWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKRWPYLSLPLARTERPEEWVPPEPATCKQGDVHDEVFEAQENGERSIVDIFSVHDRNENVYHEVHGNDDAECSCCNFPKMDKNVDHPHHLLAVWKQQFVDALSLETSESRKLNNICVRFARLCWQLLLAPWRLLFAFVPPYHIAHGWLAFICSLIFISGIAYVVTKLTDLISCVSGINPYVIAFTALAAGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGVPWLINTAYNYIAYREPLRIEDAAGLSFSLLVFFSTSVCCIAVLVFRRLTLGAELGGPRLWAWTTCIFFMLLWLIFVVLSSLKVSDII 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39045253 39053434 - Sed0000130.1 Sed05g2776 715402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2776 537 Gene3D - 98 235 IPR044880 -
Sed05g2776 537 Gene3D - 325 531 IPR044880 -
Sed05g2776 537 Pfam Sodium/calcium exchanger protein 365 529 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Sed05g2776 537 Pfam Sodium/calcium exchanger protein 46 216 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Sed05g2776 537 PANTHER SODIUM/CALCIUM EXCHANGER 17 223 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2776 K03452 - csv:101205540 903.279