Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2862 ATGGCCGGAGGTGGTGGCGGACGGTCGTTGGAAGAGACGCCGACGTGGGCCGTCGCCGTCGTTTGCTTTGTCTTGGTTTTGATTTCCATTGTTATCGAACATATTCTCCATCTCATTGGAAAGTGGTTCAAGAAGAATCACAAACGAGCCCTTTACGAAGCTCTTGAGAAAATCAAATCAGAGCTTATGCTTTTGGGGTTCATATCGCTGCTGCTGACGGTGGGGCAAAGCCTAATCACCAATATTTGCATACCGGAACACGTGGCCGACACGTGGCATCCATGTAGTCCCCAAAAGGAGCAGAATTTACTTAAACAAGATGACGTGGTCGATTCCGAGAACAATCGCCGGAAACTCCTTGCCGTCTCTCCTGTCAATGCCACTTTCCGCCGTGTCCTCGCCGGCGCCGGTGGAACCGATAAATGTGCCGCTAAGGGTAAAGTTCCATTTGTGTCGGAAGGAGGAATTCATCAGCTACATATATTCATTTTCGTTTTGGCTGTTTTTCATGTTCTGTACTGTGTCTTGACTTTAGCTTTGGGCAATGCTAAGATGAGAAGTTGGAAATCATGGGAGAAAGAAACCAGAACTGTAGAGTACCAATTCTCACATGATCCTGAGCGATTTCGATTTGCAAGAGACACGTCATTTGGGAGGAGACATTTGAGCTTTTGGACCAAATCGCCTTCTCTCATATGGATAGTTTGTTTCTTCAGACAATTCTTTCGGTCGGTTCCTAAGGTTGATTACTTAACCCTAAGACATGGTTTCGTCATGGCTCATTTGGCACCGCATAGCGATCAGAAGTTTGACTTCCAAAAATACATCAAACGATCACTCGAAGAAGACTTCAAGGTCGTTGTTAGTATCAGTCCTCCCATCTGGTTCTTCGCTGTCCTCTTTCTACTTTTCAACACTCACGGATGGAGATCTTATCTCTGGCTTCCATTTGTGCCATTAATTATTGTATTACTTGTGGGGACGAAATTGCAAGTGATAATTACGAAAATGGCACTAAGGATTCAAGAAAGAGGAGAGGTCGTGAAGGGAGTGCCAGTGGTTGAACCGGGGGATGACCTTTTTTGGTTCAACCGACCCCGGCTCATTCTTTATCTCATCAATTTTGTGCTATTTCAAAATGCATTTCAGCTTGCTTTCTTTGCCTGGACTTGGAAAGAATTTGGGATGAAGTCTTGTTTCCATGAACATACTGAGGATTTGGTCATCAGAATAACTATGGGAGTTCTCGTTCAAATCCTCTGCAGTTACGTTACACTGCCTCTCTACGCTTTGGTCACACAGATGGGTTCAACAATGAAGCCAACAATATTCAACGAAAAAGTGGCAACAGCGTTGCGAAACTGGCACCAAACGGCTCGCAAACACATCAAGCAAAATCGTGGGTCGATCACGCCCATGTCGAGCCGCCCGGCCACGCCGTCGCACCACATGTCGCCGGTGCACCTCCTCCGCCATTACCGGAGCGAATTGGACAGTGTCCACACCTCCCCCAGAAGGTCCAATTTCGACAACAACCAATGGGACCGGGACTCCCCATCCCCGTCGCACCACTTCCACAACCGCCCCCACAGTGCTGAAGGCTCCAATTCCTATAGCCACCACCAGCCTCGCGACGTCGAGACTGGCGATATCAATGTCGATCGAGATTTGCCCCAACCCGACCCAACCCAAAATCTGGATCTGATTGTTCAACAAAAGAATGATAATTCTGAGCCGCATGCGGTTAAAGTTGGGCCCAAGGAATTCTCGTTTGATAGAAGAGTTGAAAGAGTACGAGACTAG 1803 47.42 MAGGGGGRSLEETPTWAVAVVCFVLVLISIVIEHILHLIGKWFKKNHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNICIPEHVADTWHPCSPQKEQNLLKQDDVVDSENNRRKLLAVSPVNATFRRVLAGAGGTDKCAAKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPSLIWIVCFFRQFFRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRSYLWLPFVPLIIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNEKVATALRNWHQTARKHIKQNRGSITPMSSRPATPSHHMSPVHLLRHYRSELDSVHTSPRRSNFDNNQWDRDSPSPSHHFHNRPHSAEGSNSYSHHQPRDVETGDINVDRDLPQPDPTQNLDLIVQQKNDNSEPHAVKVGPKEFSFDRRVERVRD 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39719941 39726442 - Sed0002764.1 Sed05g2862 715488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2862 600 MobiDBLite consensus disorder prediction 464 481 - -
Sed05g2862 600 MobiDBLite consensus disorder prediction 564 578 - -
Sed05g2862 600 Pfam Mlo family 7 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed05g2862 600 MobiDBLite consensus disorder prediction 580 600 - -
Sed05g2862 600 MobiDBLite consensus disorder prediction 498 600 - -
Sed05g2862 600 PANTHER MLO-LIKE PROTEIN 1 2 532 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed05g2862 600 MobiDBLite consensus disorder prediction 461 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0995 Sed-Chr1:7382807 Sed05g2862 Sed-Chr5:39719941 2.40E-252 dispersed
Sed04g2611 Sed-Chr4:38548389 Sed05g2862 Sed-Chr5:39719941 8.10E-192 dispersed
Sed04g3117 Sed-Chr4:42019245 Sed05g2862 Sed-Chr5:39719941 4.10E-97 dispersed
Sed05g2862 Sed-Chr5:39719941 Sed07g2279 Sed-Chr7:38645239 9.40E-191 dispersed
Sed05g0939 Sed-Chr5:7562260 Sed05g2862 Sed-Chr5:39719941 2.70E-115 transposed
Sed10g0280 Sed-Chr10:1631594 Sed05g2862 Sed-Chr5:39719941 1.90E-118 transposed
Sed01g0994 Sed-Chr1:7348610 Sed05g2862 Sed-Chr5:39719941 1.10E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2862 K08472 - csv:101212018 1048.5