Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2894 ATGTTGTATAGCTACAAGCACAGTTTTTCAGGGTTCTCAGCCAAGCTTAATGCAAGCCAGGCAATGGCTTTATCAAAAATGGAAGCAGTGATATCAGTATTCGAGAGTAAAACGCTGCAACTCCACACAACAAGAAGTTGGGACTTTTTGGGCGTTCCCCTTCCTCCTTTCATTTCTACTCCACAGCTCATTCCCTATGGCGATGACGTTGTTGTTGCCATCTTTGATTCAGGTGTATGGCCGGAATCTGAAAGTTTCAACGACCGTTGGATGGGTCCAGTTCCATGCAGTTGGAAGGGAAAATGCGTGAAAGCATGCAGATTCAACCCTGAATCAGCCTGCAATCGCAAGCTAATTGGCGCTCGCTACTATCTTAAAGGTTTCGAGGCCGAATACGGAGCACTCGACGAGAGCGGGAACCCCGAGTTCGCGTCCCCTCGAGACTTCCTAGGCCATGGAACTCATACAGCATCCACAGCAGTGGGTGCTATCGTGACAAATGCGAGCTTCACGGGCACATCACTAGGCAAAGGCATTGCTCGAGGAGGAGCGCCAAGGGCTAGGCTTGCGGTGTACAAAGTATGCTGGGGAAAGGACTACGAAGGGAAATGCACCGATGCAGACGTGATGGCTGCTTTCGACGACGCCTTGCGTGACGGAGTGCACGTGATCTCGGCATCGTTCGGAGGAACGCCGCCGCTGGCTCCGTTTTTCGAGTCGAGCTCGGCGATTGGGTCGTTCCACGCGATGCAGAAGGGAGTGAGTGTGGTGTTCTCGGCTGGTAATGATGGACCTCAGCCTTCGCTCGTACAAAATGTGTTTCCATGGAGCATTTGTGTTGCTGCTTCAAATACGGATCGAACTTTTCCTACTCAAATACTTGTCAACCACTTCTCCATTATGGGGGAGAGCTTGATAAGTCGAAACATAATTAACGCAAAACTAGCCGACGCAATCAACTACTTCACAGGCGGAATATGCTCGCAAGAGAGTATAAGGAAAGGTGGGAAATCTGGGGCAGGGAAAGTGGTGCTTTGTTTCAGCACCATCGGTCCAGTTTCCATAACCACTGCACAGGATGCGGCTAAGGCCATCAACGCCTCGGCTCTAATATTTGCTGCGCCGCCCACCACGCAGCTCCCGGACCTTGATCCTATCGTCCCCACCATTCTTATTCACATTGCTATCGCAACTCAACTTCGAAACTTTCTTGCCGAATTGCCCAGACTCCCAATAGTAGAGATAAGGGCTGCGAGGAGTGTGATCGGAAAATCAGCGGCTCCCACTGTGGCCTACTTCTCGTCCAGAGGGCCAAGCTCAATTTCACCGGATATTCTCAAGCCAGACATAAGTGCTCCAGGAGTAAACATATTGGCAGCATGGCCTTGGGAAACAGCTCCAACAGTGAAGCCAATTAGTGTTAAAAAAGAAGTGAAATGGAATTTTCAGTCAGGGACTTCAATGTCATGCCCACACATCTCTGCAGTTGTTGCCCTCATCAAATCTCTCCATCCTAACTGGTCACCTGCTGCCATTCGATCCGCCCTCATCACCACCGCCACCAAAAGGGACTCGAGTGGCAACACCATTCTAGCAGGTGGATCCATGACAGCATCAGATCCATTCGACATTGGCAGTGGACAAGTGAATCCCATGAAGGCCATAAATCCAGGACTAATCTACGACATCTCAACCAATGATTACATTATTTTTCTCTGCAATCTTGGCTACACAGAGCAGCAAATCAGGAAGCTTCTAGAACCTTCTCCTCAAACACTTGTCTGTTGTCCACCATTTCCATCAACAACCTCCATTGCCAATCTTAACTATCCTTCCATTACACTTGCAAATCTCCATTCCACAACCACAATCAAAAGGACTCTTCATAATGTAGCTTCAAGCAAAAATGCTATCTACTTTCTTAAGGTGCTTCCTCCCAATGGTGTCCAAGTGATGGTTTGGCCTCGGGTTCTTATCTTCTCCTGGTTTAGGCAACGTGTTTCTTACTATGTTACCGTAACCCCGCTCAAGAAATCTCGAGGTCGGTATGATTTTGGCGAGATTGAATGGTCGAATGGGTTTCATACCGTCACGAGTCCTCTGGTTGTACGTGTAATGAATGTTGGTGAGTAA 2133 48.71 MLYSYKHSFSGFSAKLNASQAMALSKMEAVISVFESKTLQLHTTRSWDFLGVPLPPFISTPQLIPYGDDVVVAIFDSGVWPESESFNDRWMGPVPCSWKGKCVKACRFNPESACNRKLIGARYYLKGFEAEYGALDESGNPEFASPRDFLGHGTHTASTAVGAIVTNASFTGTSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALRDGVHVISASFGGTPPLAPFFESSSAIGSFHAMQKGVSVVFSAGNDGPQPSLVQNVFPWSICVAASNTDRTFPTQILVNHFSIMGESLISRNIINAKLADAINYFTGGICSQESIRKGGKSGAGKVVLCFSTIGPVSITTAQDAAKAINASALIFAAPPTTQLPDLDPIVPTILIHIAIATQLRNFLAELPRLPIVEIRAARSVIGKSAAPTVAYFSSRGPSSISPDILKPDISAPGVNILAAWPWETAPTVKPISVKKEVKWNFQSGTSMSCPHISAVVALIKSLHPNWSPAAIRSALITTATKRDSSGNTILAGGSMTASDPFDIGSGQVNPMKAINPGLIYDISTNDYIIFLCNLGYTEQQIRKLLEPSPQTLVCCPPFPSTTSIANLNYPSITLANLHSTTTIKRTLHNVASSKNAIYFLKVLPPNGVQVMVWPRVLIFSWFRQRVSYYVTVTPLKKSRGRYDFGEIEWSNGFHTVTSPLVVRVMNVGE 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39932882 39940759 - Sed0005491.1 Sed05g2894 715520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2894 710 CDD PA_subtilisin_like 291 406 - -
Sed05g2894 710 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Sed05g2894 710 FunFam Subtilisin-like protease SBT1.5 69 324 - -
Sed05g2894 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 701 IPR045051 -
Sed05g2894 710 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Sed05g2894 710 Pfam Subtilase family 67 526 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed05g2894 710 CDD Peptidases_S8_3 39 521 IPR034197 -
Sed05g2894 710 ProSitePatterns Serine proteases, subtilase family, serine active site. 485 495 IPR023828 -
Sed05g2894 710 Gene3D - 286 422 - -
Sed05g2894 710 Gene3D Peptidase S8/S53 domain 69 568 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed05g2894 710 Gene3D - 572 706 - -
Sed05g2894 710 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Sed05g2894 710 ProSiteProfiles Serine proteases, subtilase domain profile. 46 555 - -
Sed05g2894 710 PRINTS Subtilisin serine protease family (S8) signature 148 161 IPR015500 -
Sed05g2894 710 PRINTS Subtilisin serine protease family (S8) signature 484 500 IPR015500 -
Sed05g2894 710 PRINTS Subtilisin serine protease family (S8) signature 67 86 IPR015500 -
Sed05g2894 710 SUPERFAMILY Subtilisin-like 62 559 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2894 Sed-Chr5:39932882 Sed07g1609 Sed-Chr7:13226112 3.00E-143 dispersed
Sed05g2894 Sed-Chr5:39932882 Sed01g4260 Sed-Chr1:70893589 1.00E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2894 - - - 0.0