Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g2941 ATGAACAAAGGTTTTTGGTTGGCAAAGGGTGCGGGGCATGAAAATGATCCAAATTCAACTTTTGACTGCCAGTCATTATTAGACACTAAGCGGGCTCATCACTGGTTTATAGATGGTTGTGAAGCACAGGTTTTCCCCAACAAGAAGCAAGCAATTCAAGCTCCAACTAGTAAAATGATAGGAACCCTTTCAAATGTGAATGTTCTACAATGGGAGCAGCATAGTGATAATTATCATTCTATTTCACATCAACTTATTGGTCGTTTATTTGGATCTGAATCAGTGAGGCCTGCTGACTTTGAACTAACCAAAGCATCTTCTGTAATTCCTGATAATTTTGATCTCAGGAGAAAAGGTCTGGGAGACCAATATGGAGAGGATGAGGATGCATCTGTTGGGTTATCTATATCTCATGGTTTGGAGGATCCTGAATCATCTCTTAGCTATGGAGGAATTAGAAAAGTGAAAATCAATCAGGTTAAAGATAATGTCCATGGTTTGCAACCATGTCTAAGAAATGATTATAATAGGGAAGATGGTGGTCAACTATCCATAGAAGGTTACTATAAGGAAATAGAGTCGGGTCTTGTATCTGTGGGATCGGCCTATATTAAGGAGGACGAGGGTTTCGATTTGATAAATCAAACCTCGAACGATGGGGATCACCATATTGGCTTACTAGGAGGTCATAGTGGAAAGATAGATCACAATGTTGTTTCCATTGATGACGATTACAGTAAGCAGGATCCTAATATTATCTCATTTGGTGGATTTCCTGATGATCAAGATATTATCTCCTTAGGCAGGTCTCTTGGCAGCCATGACCCAACATTCTACGAATCTTCATTCCACCCATCTGAAGTTGTTGGTGTCACAGATTTCAAATCGTCAAATTTTGATGTATCTGTAAGCAGTACTCAGATAGCTAAGCAAAAGCCCGATATGATACCAAAGAGTAGGCCAGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCAAATGTTCGAAGTTTGATATCAACCGGTATGCTCGATGGTGTTCCTGTGAAGTATGTTTCTGTAGCTAGAGAGGAGCTTCGTGGAGTTATAAGGGGATCTGGCTATCTCTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCCTATGAGTTTGAGCGCCATGCTGGCTGCAAAACAAAACACCCAAATAACCATATATACTTCGAGAATGGTAAGACTATTTATCAGATAGTACAAGAATTAAGAAGCACGCCAGAGAGCTTGTTGTTTGATACAATTCAAACCATCTTTGGTGCACCTATCAATCAGAAATCGTTTCGGATTTGGAAAGGTAAAGAAGTTTCTATTTCAGAAATTCATCCACGAGAAGCAACTCTTACCCCTCTATTGCACTTACACACACGCACAAACACGTTAAGAATTGAATTGCTGCAGAGGCTAGGACTGTAA 1461 39.9 MNKGFWLAKGAGHENDPNSTFDCQSLLDTKRAHHWFIDGCEAQVFPNKKQAIQAPTSKMIGTLSNVNVLQWEQHSDNYHSISHQLIGRLFGSESVRPADFELTKASSVIPDNFDLRRKGLGDQYGEDEDASVGLSISHGLEDPESSLSYGGIRKVKINQVKDNVHGLQPCLRNDYNREDGGQLSIEGYYKEIESGLVSVGSAYIKEDEGFDLINQTSNDGDHHIGLLGGHSGKIDHNVVSIDDDYSKQDPNIISFGGFPDDQDIISLGRSLGSHDPTFYESSFHPSEVVGVTDFKSSNFDVSVSSTQIAKQKPDMIPKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGVIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKGKEVSISEIHPREATLTPLLHLHTRTNTLRIELLQRLGL 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40260929 40264412 + Sed0023268.2 Sed05g2941 715567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g2941 486 PANTHER AUTOIMMUNE REGULATOR 1 449 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Sed05g2941 486 Pfam Tify domain binding domain 363 418 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2941 Sed-Chr5:40260929 Sed07g2464 Sed-Chr7:40387145 5.70E-69 dispersed
Sed05g2940 Sed-Chr5:40260929 Sed05g2941 Sed-Chr5:40260929 3.00E-224 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g2941 - - - 0.0