Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3323 ATGGACGGAGATCAGCCGCCGGCGACGGCGCCGGCACCGCCCACGTTGGCCATCCACCCAGCCGTAGCGCCATTATCATTCTTACTTGGAACATGGAGAGGCAAAGGCGAGGGTGGATTTCCCACCATCAATTCCTTCTCTTACGGCGAGGAGCTCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACACTCAGAAGACTTGGAAGCTTGATTCTAGAGAGCCTATGCACGCCGAGAGTGGCTATTGGCGTCCCAAGCCGGATGGTTCCATTGAGGTAGTCATCGCGCAAAGCACTGGTCTCGTTGAACTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAAAGCTCCAAAGTGAACTTGTGGGGAATGCTTCTAAGGTGAAAGATATAACGAGAGTTTTTAAGCTGGAGGATGGAAACCTTTCCTACGTGGTTCAGATGGCTACCGGCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTTTCTAAGGTTTGA 507 50.1 MDGDQPPATAPAPPTLAIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYTQKTWKLDSREPMHAESGYWRPKPDGSIEVVIAQSTGLVELQKGTYNAEEKVIKLQSELVGNASKVKDITRVFKLEDGNLSYVVQMATGLTSLQPHLKALLSKV 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42577390 42581321 - Sed0001463.1 Sed05g3323 715949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3323 168 SUPERFAMILY Lipocalins 18 168 IPR012674 -
Sed05g3323 168 Gene3D - 17 168 IPR012674 -
Sed05g3323 168 CDD lipocalin_heme-bd-THAP4-like 22 168 IPR014878 -
Sed05g3323 168 PANTHER THAP4 PROTEIN 9 168 IPR045165 -
Sed05g3323 168 Pfam THAP4-like, heme-binding beta-barrel domain 22 167 IPR014878 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3323 - - - 0.0