Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3662 ATGGCTTCCAACGAAATTGCCCACGATTTCTCCCCCATGTTCGTAGTTTACAACGACGGTCGAATCCACCGCCTCGTCGGAAACGAATTTTCCCCTCCCTCTCTCGACTCACTCACCGGAGTCGAGTCAAAAGACGTGGTCATCTCGCCGGAAACCGCCGTCTCTGCTCGGATTTACAGGCCCAAGCTCGCCGCCGTTGAAACTCGGAAGCTCCCTCTTCTCGTTTACTTCCACGGCGGCGGGTTCGTCATCGAATCGGCATTCTCCCCCACCTACCACTGCCTTATCAACTCCTTAGTCGCCGGAGCCAACATCGTCGCCGTCTCCGTCGAGTACCGCCGCGCCCCGGAGCACCCGCTTCCCATCGCTTACGAAGATTCATGGGCCGCTCTAAAATGGGTCACCGCCCATTCCGCCGGAACCGGGCCGGACGAGTGGATCAACGAAATTGCGGATCTGGACCGGGTTTATTTAGCCGGAGATAGCGCCGGAGCGAACATAGCTAACCACATCGCGGTTCGGGTCGGGGTGGAGAATTTAGCCGGGTTGAATCTGAGGGGGTTGATTTTGGTTCATCCTTATTTCTGGGGGGGGAAATCGATCGGAGATGAAGAGAAGCTGGATCCGAAGGCGAGGGAGTTTGTTGAGAAATTGTGGCATGTGGTTTGGCCTTCGATGATCGGGTTGGACGACCCGGATGTGAACCCGGAATTCGACCCGAATTTGGGGCGGTTAACGGCGGAGAGAGTGGCGGTTTTTGTGGCGGAGAAGGATTCTTTGAAAAACAGAGGATGGTTTTACGGCGAGTGTTTGGAGAAATCTGGATGGGGCGGCGCCGTCGAGGTGGTGGAGACGAAGGGGGAAGGCCACGTGTTCTTTTTGTTCAAACCGAAGTCCGACGTGGCACTGGACTTCTTCGGAAAGCTTGCGGCCTTCATCAATGGCGTCGGCCATGACTGA 960 56.35 MASNEIAHDFSPMFVVYNDGRIHRLVGNEFSPPSLDSLTGVESKDVVISPETAVSARIYRPKLAAVETRKLPLLVYFHGGGFVIESAFSPTYHCLINSLVAGANIVAVSVEYRRAPEHPLPIAYEDSWAALKWVTAHSAGTGPDEWINEIADLDRVYLAGDSAGANIANHIAVRVGVENLAGLNLRGLILVHPYFWGGKSIGDEEKLDPKAREFVEKLWHVVWPSMIGLDDPDVNPEFDPNLGRLTAERVAVFVAEKDSLKNRGWFYGECLEKSGWGGAVEVVETKGEGHVFFLFKPKSDVALDFFGKLAAFINGVGHD 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44812129 44813298 + Sed0000165.1 Sed05g3662 716288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3662 319 Gene3D alpha/beta hydrolase 11 316 IPR029058 -
Sed05g3662 319 PANTHER ARYLACETAMIDE DEACETYLASE 12 300 IPR050466 -
Sed05g3662 319 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 156 168 IPR033140 -
Sed05g3662 319 Pfam alpha/beta hydrolase fold 74 293 IPR013094 GO:0016787(InterPro)
Sed05g3662 319 SUPERFAMILY alpha/beta-Hydrolases 5 315 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0344 Sed-Chr1:2589958 Sed05g3662 Sed-Chr5:44812129 4.60E-32 dispersed
Sed01g0345 Sed-Chr1:2595352 Sed05g3662 Sed-Chr5:44812129 1.60E-136 dispersed
Sed05g3662 Sed-Chr5:44812129 Sed13g1728 Sed-Chr13:22277623 1.60E-75 dispersed
Sed05g3660 Sed-Chr5:44804394 Sed05g3662 Sed-Chr5:44812129 2.00E-72 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3662 - - - 0.0