Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3734 ATGGACTTTCTCACTCTTCTCTTTCTCCTCCTTGTTGCTTTCTTCATCCTCCAACAGCTCAAAACCCGCCGGAAAAATCTGCCGCCGTCTCCGCCGTGTGTTCCGGTCATCGGCCACCTCCACCTCCTCAAACGCCCCATCCACCGGAATTTTCAAACCATCGCCGCCAAGTACGGCCCCATTTTCACCCTCCGACTCGGATCTCGCCTTGCCCTCGTTGTCTCTTCCCTCCAAATCGCCGAACAATGTTTCACTACAAACGACGTCGTCTTCGCCAACCGCCCCCGCCTGCTCATCAGCCGTTACCTGGGCTACAACTGCACCACCATCTCCACCGCCCCGTACGGCGACTACTGGCGGAACCTCCGCCGCCTCTCCGCCGTGGAGATCTTCTCGACGGCAAAACTAAACGCATCTCTGTGCATCCGCAAGGAAGAAATCCGGCGATTCCTCCTGAAACTCCACTCGGAATGGTTCGCCAAAGCGGAGCTGAAATCGATGTTTTCGGAACTGAGCTTCAACGTGGTGATGCGGGTGGTGGCCGGAAAACGGTACTACGGCGAGGAGGTTTCCGACGAGGCGGAGGCGAGGGAGTTCCGGGAGCTGATGGAGGAGATTTCGGCCCAGGGCGGGGCTTCGCATTGGGAGGATTTTATGCCGATCTTGAAATGGATCGGGCGCGGTGGATTCGAGAACAGTTTGAAGAAATCCGGGGAAAGGGCGGATCGGTTTATGCAGGCGTTGATTGAAGAACGCCGGAATTTGAAACTGCTCGGAACTGAAAAACAGAGGAATCTGCTTGATCGGCTTTTGGAGTTGCAGCTTTCTGAGCCGGAATATTACTCCGATCACACAATTAAAGGGATCGTTCTGGTGTTGTTGCGTGCCGGAACAGATACATCATCTGTGACTTTGAATTGGGCAATGACTCAACTACTCAACAATCCGGAAATGTTGGCCAAAGCAAGAGCTGAGATAGACACCAAAATCGGCCAAGATCGCCCCATCAACGAAGGAGATCTCCCCAACCTCGACTACCTCCAAGCCATTATTTCCGAGACCTTCCGCCTTCACCCTGCCGCACCGATGCTCCTCACACACTACTCCTCTGACGATTGCGTCGTTGCAGGCTACGACATTCCTCGTGGGACAACGTTGTTGGTCAATGCCTGGGCCATTCACCGAGACCCGAAGTTGTGGGACGACCCGACGAGCTTCAACCCAGAGAGGTTTTTTGGGCCAGGAAATGAGTTGAACTCAAACAAAATAATTCCTTTTGGGATTGGAAGGAGGGCTTGTCCTGGTGCGAGCATGGCTCAACGTTTCATAGGATTGACTTTGGGGCTATTGATTCAATGCTATGAGTGGAAAAAGGATGGAGAAGAAAATGTGGACATGGCCGAAGGTGGAGGCATTACTATTCATAAAGTCAAGCCTTTGGAAACTATGTGCAAAGCTCGCCCAATTATGGTTAGAGTTCTATCCAATGGTTTGGACTAA 1500 52.6 MDFLTLLFLLLVAFFILQQLKTRRKNLPPSPPCVPVIGHLHLLKRPIHRNFQTIAAKYGPIFTLRLGSRLALVVSSLQIAEQCFTTNDVVFANRPRLLISRYLGYNCTTISTAPYGDYWRNLRRLSAVEIFSTAKLNASLCIRKEEIRRFLLKLHSEWFAKAELKSMFSELSFNVVMRVVAGKRYYGEEVSDEAEAREFRELMEEISAQGGASHWEDFMPILKWIGRGGFENSLKKSGERADRFMQALIEERRNLKLLGTEKQRNLLDRLLELQLSEPEYYSDHTIKGIVLVLLRAGTDTSSVTLNWAMTQLLNNPEMLAKARAEIDTKIGQDRPINEGDLPNLDYLQAIISETFRLHPAAPMLLTHYSSDDCVVAGYDIPRGTTLLVNAWAIHRDPKLWDDPTSFNPERFFGPGNELNSNKIIPFGIGRRACPGASMAQRFIGLTLGLLIQCYEWKKDGEENVDMAEGGGITIHKVKPLETMCKARPIMVRVLSNGLD 499
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 45252888 45257407 - Sed0020417.1 Sed05g3734 716360
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3734 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PANTHER CYTOCHROME P450 82C3-RELATED 7 487 IPR050651 -
Sed05g3734 499 CDD CYP81 59 480 - -
Sed05g3734 499 SUPERFAMILY Cytochrome P450 28 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed05g3734 499 Pfam Cytochrome P450 28 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 Gene3D Cytochrome P450 14 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3734 499 FunFam Cytochrome P450 family protein 19 490 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2698 Sed-Chr1:21603718 Sed05g3734 Sed-Chr5:45252888 2.80E-132 dispersed
Sed05g3734 Sed-Chr5:45252888 Sed10g0675 Sed-Chr10:4665286 1.40E-163 dispersed
Sed13g1698 Sed-Chr13:22054675 Sed05g3734 Sed-Chr5:45252888 1.80E-78 dispersed
Sed05g3734 Sed-Chr5:45252888 Sed05g3736 Sed-Chr5:45269952 9.70E-141 proximal
Sed01g0422 Sed-Chr1:3185658 Sed05g3734 Sed-Chr5:45252888 2.20E-132 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3734 K13260 - csv:101210967 748.814