Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed05g3737 ATGGATATTCTTCTCTTGGTTTCAATTTCTCTCATTCTATTTTCTCTTCTCTTTGCTTTCAACTTTGAGTTGAGACCTCGAAGATTAAACCTCCCACCAAGCCCTCTCTTTTCTCTTCCACTAATAGGCCATCTCCATCTCCTCAAACATCCACCCCATCAAACATTTCAAACCCTCTCACAAAAACTCGGCCCCGTCTTCTCCCTCCGCTTCGGTTCCCGTCTCGTCGTGATCGTATCCTCTCCATCCGCCGTTCAAGAATGCTTTACGAAGAACGATCTCATCCTCGCAAATCGGCCGTTGTTGAAAACGGGAAAGTACTTGGCATACAACCACACCACTATGGCGGTGTCACCTTACGGCGAACACTGGCGAAACCTCCGCCGAATCGGGTCTCTCGAGATCTTTTCCACGAGCCGGATTAATTTGTTCGTGGGAATTCGAGAAGACGAAGTAAAACGTTTGTTGATGAAATTATGTACCAATGATGGTGGGTTGTTGGTGGAAGAGTTTAGGGAAGTGGAATTGGAGGCTATGTTGTTGGATCTTATGTTTAATATTATTATGAGAATGGTGAGTGGAATGAAGTTTTATGAAGAGGAAAAAAATGATTCTAAGAAGTTTAGAGATATGGTGACAGAAATTATGGCACAAGGTGGAGCCACAAATGCTGGTGATTTTATACCTTTATTGAATTGGATTAATCCAAGTGGTTTTAAGAAGAGGATTATAAATCTTGGACAAAAAGGTGATGAACTTCTTCAAGGATTAGTCGATAAGATTAGGAATAAGAAAGATGGAGGGAACACTATGATTCATCATTTACTTAGCTTGCAGAAAATTGAGCCTCATTACTATAGCGACCAAATCATCAAAGGACTTGTTCAAGTTATATGTTTAGCTGGAATAGATACATCAGCGGTGACTTTAGAATGGGCACTATCCCATTTACTCAACAATCCAAAGGTGTTACAAAAAGCAAAAGTTGAGATAGATAGTTTAATCGGACAAGATCGTATGGTTAACGAATCTGACTTGTCAAGTTTGAGTTACTTGCAAGGAATAATAGCGGAGACCCTACGGCTAAGCCCGGCTGCTCCTTTGCTTGTACCGCACTGCCCATCTGAAGATTGCAAGATCGAAGGTTACGACGTTCCACGTGACACAATGGTATTGATTAACGCGTGGGCTATACATAGAGATCCAAATCTATGGGAAGATGCCACTAGTTTTAAACCTGAAAGGCATATTGGAAATGGAAACATTGGAAGTGAGGCATACAAACTAATACCATTTGGGTTGGGGAGAAGAGCTTGTCCTGGTGTGGGAATGGCTCAACGTTTTGTTGGCTTAACTTTGACATCATTGATTCAAGGCTTTGATTGGGAAAGAGTGAGCACCTCGTTGGTTGATATGACTGAAGGTAAAGGTCTCACTGTGCCCAAAGCTCAACCTTTGATAGCTAAATGTAAACCTCGTCCAATCATGAAAACAATTATGAGTGTAGCAACAGGTCGTATTTAA 1524 41.54 MDILLLVSISLILFSLLFAFNFELRPRRLNLPPSPLFSLPLIGHLHLLKHPPHQTFQTLSQKLGPVFSLRFGSRLVVIVSSPSAVQECFTKNDLILANRPLLKTGKYLAYNHTTMAVSPYGEHWRNLRRIGSLEIFSTSRINLFVGIREDEVKRLLMKLCTNDGGLLVEEFREVELEAMLLDLMFNIIMRMVSGMKFYEEEKNDSKKFRDMVTEIMAQGGATNAGDFIPLLNWINPSGFKKRIINLGQKGDELLQGLVDKIRNKKDGGNTMIHHLLSLQKIEPHYYSDQIIKGLVQVICLAGIDTSAVTLEWALSHLLNNPKVLQKAKVEIDSLIGQDRMVNESDLSSLSYLQGIIAETLRLSPAAPLLVPHCPSEDCKIEGYDVPRDTMVLINAWAIHRDPNLWEDATSFKPERHIGNGNIGSEAYKLIPFGLGRRACPGVGMAQRFVGLTLTSLIQGFDWERVSTSLVDMTEGKGLTVPKAQPLIAKCKPRPIMKTIMSVATGRI 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45274662 45278153 - Sed0000222.1 Sed05g3737 716363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed05g3737 507 FunFam Cytochrome P450 family protein 23 496 - -
Sed05g3737 507 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed05g3737 507 CDD CYP81 64 486 - -
Sed05g3737 507 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 PANTHER CYTOCHROME P450 82C3-RELATED 13 493 IPR050651 -
Sed05g3737 507 Gene3D Cytochrome P450 12 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed05g3737 507 SUPERFAMILY Cytochrome P450 32 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0422 Sed-Chr1:3185658 Sed05g3737 Sed-Chr5:45274662 2.30E-198 dispersed
Sed01g0423 Sed-Chr1:3200958 Sed05g3737 Sed-Chr5:45274662 1.00E-193 dispersed
Sed01g0424 Sed-Chr1:3209323 Sed05g3737 Sed-Chr5:45274662 6.60E-122 dispersed
Sed01g0427 Sed-Chr1:3240766 Sed05g3737 Sed-Chr5:45274662 9.20E-192 dispersed
Sed05g3737 Sed-Chr5:45274662 Sed05g3740 Sed-Chr5:45291773 2.90E-294 dispersed
Sed14g1091 Sed-Chr14:20428652 Sed05g3737 Sed-Chr5:45274662 1.70E-73 dispersed
Sed05g3736 Sed-Chr5:45269952 Sed05g3737 Sed-Chr5:45274662 1.00E-267 tandem
Sed05g3737 Sed-Chr5:45274662 Sed05g3738 Sed-Chr5:45280564 5.70E-72 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed05g3737 K13260 - csv:101204413 698.738